011A Example Homology Modelling MT1

Example: Homology Modelling of MT1

Situation

In this example we will unfuse MT1 to its unitprot sequence (https://www.uniprot.org/uniprot/P48039#sequences). We start with a fused pdb called "OPTSUBJECT.pdb" This pdb has multiple subtleties:

• It is half baked from a unfinished PHENIX output. It contains multiple mis-labelled chains.
• IT contains ligand and water. We will follow the ICM User Guide to make a homology model.

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