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011A Example Homology Modelling MT1

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Jordy Homing Lam edited this page Aug 21, 2021 · 1 revision

Example: Homology Modelling of MT1

Situation

In this example we will unfuse MT1 to its unitprot sequence (https://www.uniprot.org/uniprot/P48039#sequences). We start with a fused pdb called "OPTSUBJECT.pdb" This pdb has multiple subtleties:

  • It is half baked from a unfinished PHENIX output. It contains multiple mis-labelled chains.
  • IT contains ligand and water. We will follow the ICM User Guide to make a homology model.

Script

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