Tidal Stratified Flow over Shallow Supercritical Topography

Code to generate the simulations reported in "Saturation of Internal Tide Generation over Shallow Supercritical Topography" by Chang, J-X and Klymak, J. M.

Some Runs on CEDAR.computecanada.ca

Contents:

• MITgcm66h is my version with NF90io.
• input is where most model setup occurs.
• python is where most processing occurs.

Vagaries

• cannot seem to get netcdf to work
• work in project/jxchang/. I do a softlink: ln -s /home/jxchang/project/jxchang/TallRid_nonhydr TallRid_nonhydr.
• link 'results/' to /home/jxchang/scratch/TallRid_nonhydr

To compile on Cedar

• module load gcc openmpi
• cd build/
• ../MITgcm66h/tools/genmake2 -optfile=../build_options/cedargcc -mods=../code/ -rootdir=../MITgcm66h --mpi
• OPTIONAL: make CLEAN to make sure no bad compiled files are left over
• make depend
• make

To run

• run python gendata.py
• run sbatch -J jobname runModel.sh where "jobname" is the directory where you put the "results"
• run sq to see what progress is...