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Add LSM modules#88

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kabilar merged 2 commits into
lincbrain:mainfrom
kabilar:lsm-features-no-psoct
Jun 30, 2026
Merged

Add LSM modules#88
kabilar merged 2 commits into
lincbrain:mainfrom
kabilar:lsm-features-no-psoct

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@kabilar

@kabilar kabilar commented Jun 30, 2026

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After discussion on Slack, we decided that at this time to only merge in the changes from #83 that did not include the PSOCT pipeline.

Changes

  • Add LSM modules to convert either a single TIFF and spool files of a single strip to OME-Zarr/NIfTI-Zarr
  • Create and publish a Docker image

cc @balbasty @jimmyjam100 @satra @ayendiki

@kabilar

kabilar commented Jun 30, 2026

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I wasn't able to keep the commit history but this work was done by Kaidong in #83. And I reviewed it there.

@kabilar
kabilar merged commit c85f97d into lincbrain:main Jun 30, 2026
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