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BEASTling does not clean up concept names with commas properly

Status: Open.

#261 In lmaurits/BEASTling;

· Anaphory opened on May 11, 2022

Binary CTMC binarised=True

Status: Open.

#260 In lmaurits/BEASTling;

· acraevschi opened on Jul 23, 2021

'BinaryModel' object has no attribute 'share_params'

Status: Open.

#258 In lmaurits/BEASTling;

· Anaphory opened on Aug 26, 2020

Should __distribution__ be a property of all clocks?

Status: Open.

#257 In lmaurits/BEASTling;

· Anaphory opened on Jun 28, 2020

Report could use slightly more clever templating

Status: Open.

#256 In lmaurits/BEASTling;

· Anaphory opened on Jun 28, 2020

Should base-clocks/models/priors be abstract?

Status: Open.

#255 In lmaurits/BEASTling;

· Anaphory opened on Jun 28, 2020

Document and Unify Exit Codes

Status: Open.

#254 In lmaurits/BEASTling;

· Anaphory opened on Jun 28, 2020

PyYAML, an indirect dependency, needs Python>3.4

bug

question

Status: Open.

#253 In lmaurits/BEASTling;

· Anaphory opened on Jun 21, 2020

LogNormal Relaxed Clock parameterized by “variance”, is actually “stdev in log space”

Status: Open.

#252 In lmaurits/BEASTling;

· Anaphory opened on Jun 21, 2020

Make TreePrior.add_state_nodes use state instead of beastxml

enhancement

Status: Open.

#251 In lmaurits/BEASTling;

· Anaphory opened on Jun 20, 2020

OSError: File name too long, instead of being interpreted as list

bug

Status: Open.

#249 In lmaurits/BEASTling;

· Anaphory opened on Aug 27, 2019

Hack BEAST XML using DOM notation?

question

Status: Open.

#246 In lmaurits/BEASTling;

· Anaphory opened on Aug 9, 2019