[codex] Add diagnostic AI priority subset#10365
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Summary
This PR adds a lightweight MONDO representation for the rare disease diagnostic AI prioritization artifact described in #10364.
Changes:
rare_disease_ai_diagnostic_priorityandrare_disease_ai_diagnostic_priority_initialsubset membership to 427 active MONDO terms from the companioninitialdisease list.IAO:0000233tracker links to Add MONDO subset for rare diseases prioritized for diagnostic AI development #10364 on the annotated active terms.The companion YAML has 431
initialMONDO IDs. Four are obsolete in this checkout and were intentionally left unannotated rather than inferred/remapped:MONDO:0013935obsolete Usher syndrome type 1J, replaced byMONDO:0012273MONDO:0020732obsolete progeria, replaced byMONDO:0015333MONDO:0700294obsolete CTCF-related neurodevelopmental disorder, replaced byMONDO:0014213MONDO:0800029obsolete interstitial lung disease 2, considerMONDO:0800497andMONDO:0800504Sources:
Part of #10364.
Validation
initialIDs from the companion YAML.sh run.sh make NORM && mv NORM mondo-edit.obofromsrc/ontology.robot convert --catalog src/ontology/catalog-v001.xml -i src/ontology/mondo-edit.obo -f obo -o mondo-edit.TMP.obo.git diff --check.