Skip to content

Infer output-dir from pipeline params [ci fast] #6009

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Draft
wants to merge 1 commit into
base: master
Choose a base branch
from

Conversation

pditommaso
Copy link
Member

This PR attempts to infer the workflow output directory from the pipeline conventional outdir parameter

@pditommaso pditommaso marked this pull request as draft April 25, 2025 07:12
Copy link

netlify bot commented Apr 25, 2025

Deploy Preview for nextflow-docs-staging canceled.

Name Link
🔨 Latest commit 4fa8d45
🔍 Latest deploy log https://app.netlify.com/sites/nextflow-docs-staging/deploys/680b35d2ed7eb500087bcbec

@bentsherman
Copy link
Member

This is not needed, just set this in your config:

outputDir = params.outdir

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants