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… sufficient clock signal
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Description of proposed changes
Norovirus genome has known breakpoints between ORF1-ORF2 (crosses the RdRp-VP1 boundary) and ORF2-ORF3. Ergo it may make more sense and reduce the number of trees if we focus on the non-recombining regions for phylogenetic trees.
Only building time trees within a genotype (e.g. GII.2) allows for time inference. Otherwise, the all trees are too diverged to get a reasonable inference and should only be produced as divergence trees.
From test run: https://github.com/nextstrain/norovirus/actions/runs/18925586046
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