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Pull requests: nf-core/configs

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Pull requests list

Update tufts config to support gpu partition so that applications such as nvidia parabricks can run on GPUs
#1044 opened Mar 12, 2026 by zhan4429 Loading…
8 tasks
1
Mahuika HPC config
#1043 opened Mar 12, 2026 by jen-reeve Loading…
8 tasks done
1
@jen-reeve
2
Update for NYU for torch cluster
#1034 opened Mar 4, 2026 by genericdata Loading…
1
Use strict syntax for bih config
#1031 opened Mar 2, 2026 by sellth Loading…
1
fix co2footprint section in qbic configs and remove check_resource function
#1024 opened Feb 26, 2026 by famosab Loading…
8 tasks
9
WIP : Fix strict syntax errors
#1019 opened Feb 24, 2026 by maxulysse Loading…
8 tasks
3
Make pipeline configs strict syntax compatible
#1017 opened Feb 18, 2026 by nvnieuwk Loading…
1
Make vsc_calcua strict syntax compatible
#1016 opened Feb 18, 2026 by nvnieuwk Loading…
2
Make vsc_kul_hasselt strict syntax compatible
#1015 opened Feb 18, 2026 by nvnieuwk Loading…
Bump singularity and java module versions
#1014 opened Feb 13, 2026 by RoganGrant Loading…
test default nextflow and (without failing) latest-everything
#1012 opened Feb 13, 2026 by mashehu Loading…
2
Increase max memory and CPUs in mjolnir_globe.config
#1010 opened Feb 12, 2026 by bentpetersendk Loading…
1 of 8 tasks
Increase max memory and CPUs in mjolnir_globe.config
#1009 opened Feb 12, 2026 by bentpetersendk Loading…
1 of 8 tasks
Increase memory and CPU limits in configuration
#1008 opened Feb 11, 2026 by bentpetersendk Loading…
7 tasks
Increase resource limits on PELLE UPPMAX, 2 days => 10 days
#1007 opened Feb 9, 2026 by andreyhgl Loading…
1 of 8 tasks
1
Add bactmap_update_global_use.config file
#995 opened Dec 16, 2025 by iamamofa Loading…
8 tasks
3
Revise documentation for Imperial CX3 HPC Configuration
#991 opened Dec 11, 2025 by davidhemp Loading…
8 tasks
2
Updated to add GPU farms and use the accelerator format
#989 opened Dec 9, 2025 by mp15 Loading…
3
update mccleary config
#985 opened Nov 26, 2025 by ggabernet Loading…
8 tasks
1
Update Apptainer cache directory path
#965 opened Oct 17, 2025 by CodingKaiser Loading…
8 tasks
1
Increase memory allocation in eddie.config
#963 opened Oct 7, 2025 by ggrimes Loading…
8 tasks
1
Newcastle
#961 opened Sep 26, 2025 by chriswyatt1 Loading…
6 of 8 tasks
6
Restructure all the configs
#951 opened Aug 29, 2025 by edmundmiller • Draft
@edmundmiller
1
Update NCI Gadi config
#920 opened Jun 25, 2025 by georgiesamaha Loading…
6 of 8 tasks
4
[WIP] Add the Brain Image Library (BIL) cluster profile
#890 opened Apr 15, 2025 by icaoberg Loading…
6 tasks done
9
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