Update files for MLST tests #8388
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- updating test file to another file in test-datasets - updating snapshots
famosab
reviewed
May 2, 2025
| @@ -16,7 +16,7 @@ nextflow_process { | |||
| process { | |||
| """ | |||
| input[0] = [ [ id:'test', single_end:false ], // meta map | |||
| file("https://raw.githubusercontent.com/nf-core/test-datasets/bactmap/genome/NCTC13799.fna", checkIfExists: true) | |||
| file("https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/genomics/prokaryotes/bacteroides_fragilis/genome/genome.fna.gz", checkIfExists: true) | |||
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Can you update the path to not use raw.github... (see other modules for reference) :)
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I updated the path to match the nf-core pattern.
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This PR fixes failing tests for MLST by updating to a new input file. The previous file had been deleted from the test-datasets repository.
PR checklist
Closes #8152
nf-core modules test <MODULE> --profile dockernf-core modules test <MODULE> --profile singularitynf-core modules test <MODULE> --profile conda