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@acvander acvander commented May 1, 2025

This PR fixes failing tests for MLST by updating to a new input file. The previous file had been deleted from the test-datasets repository.

PR checklist

Closes #8152

  • [ x ] This comment contains a description of changes (with reason).
  • [ x ] If you've fixed a bug or added code that should be tested, add tests!
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • [ x ] nf-core modules test <MODULE> --profile docker
      • [ x ] nf-core modules test <MODULE> --profile singularity
      • [ x ] nf-core modules test <MODULE> --profile conda

- updating test file to another file in test-datasets
- updating snapshots
@famosab famosab added this pull request to the merge queue May 5, 2025
Merged via the queue into nf-core:master with commit f23f324 May 5, 2025
16 checks passed
zachary-foster pushed a commit to zachary-foster/modules that referenced this pull request May 8, 2025
* fixing mlst unit tests
- updating test file to another file in test-datasets
- updating snapshots

* updating test file path to match nf-core pattern

---------

Co-authored-by: Famke Bäuerle <[email protected]>
famosab added a commit to famosab/modules that referenced this pull request Jun 3, 2025
* fixing mlst unit tests
- updating test file to another file in test-datasets
- updating snapshots

* updating test file path to match nf-core pattern

---------

Co-authored-by: Famke Bäuerle <[email protected]>
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MLST Unit Tests Fail

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