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Adopt typed params for pipeline-specific parameters
nf-core linting
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Adopt typed params for pipeline-specific parameters
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Derive taxonomy from --refseqfile FASTA headers when --taxonomy is absent
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Derive taxonomy from --refseqfile FASTA headers when --taxonomy is absent
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Update seqtk/subseq and fasta_hmmsearch_rank_fastas (nf-core/modules#12800)
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Update seqtk/subseq and fasta_hmmsearch_rank_fastas (nf-core/modules#12800)
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Add --save_domtblout option
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Template update for nf-core/tools v4.1.0
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Bump version to 2.2.0dev
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Bump version to 2.2.0dev
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v2.1.0 - 2026-08-03
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