Add GPU accelerated STAR and Markdups (using Parabricks rna_fq2bam) #2
Triggered via pull request
February 4, 2026 15:35
gburnett-nvidia
Status
Cancelled
Total duration
21m 21s
Artifacts
–
Annotations
3 errors and 5 warnings
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GPU Test | singularity | 1 | 25.04.0 | pipeline
The operation was canceled.
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GPU Test | docker | 1 | 25.04.0 | pipeline
The self-hosted runner lost communication with the server. Verify the machine is running and has a healthy network connection. Anything in your workflow that terminates the runner process, starves it for CPU/Memory, or blocks its network access can cause this error.
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confirm-pass-gpu
Process completed with exit code 1.
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GPU Test | docker | 2 | 25.04.0 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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GPU Test | docker | 2 | 25.04.0 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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GPU Test | singularity | 2 | 25.04.0 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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GPU Test | singularity | 2 | 25.04.0 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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GPU Test | singularity | 1 | 25.04.0 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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