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Bump Parabricks to version 4.7.1 Run GPU nf-tests #1017: Pull request #1899 synchronize by gburnett-nvidia
1d 0h 1m 17s gburnett-nvidia:bump-parabricks-star-version
gburnett-nvidia:bump-parabricks-star-version
1d 0h 1m 17s
Bump Parabricks to version 4.7.1 Run GPU nf-tests #1016: Pull request #1899 synchronize by gburnett-nvidia
39m 55s gburnett-nvidia:bump-parabricks-star-version
gburnett-nvidia:bump-parabricks-star-version
39m 55s
enable a pre-built bowtie2 index for rrna removal Run GPU nf-tests #1015: Pull request #1892 synchronize by emmanuel-tan
Action required emmanuel-tan:enhancement/rrna-bt-index
emmanuel-tan:enhancement/rrna-bt-index
Action required
enable a pre-built bowtie2 index for rrna removal Run GPU nf-tests #1014: Pull request #1892 synchronize by emmanuel-tan
Action required emmanuel-tan:enhancement/rrna-bt-index
emmanuel-tan:enhancement/rrna-bt-index
Action required
Bump Parabricks to version 4.7.1 Run GPU nf-tests #1013: Pull request #1899 synchronize by gburnett-nvidia
3d 0h 0m 4s gburnett-nvidia:bump-parabricks-star-version
gburnett-nvidia:bump-parabricks-star-version
3d 0h 0m 4s
Bump Parabricks to version 4.7.1 Run GPU nf-tests #1012: Pull request #1899 opened by gburnett-nvidia
1d 0h 2m 54s gburnett-nvidia:bump-parabricks-star-version
gburnett-nvidia:bump-parabricks-star-version
1d 0h 2m 54s
Merge pull request #1894 from nf-core/nf-core-template-merge-4.0.3 Run GPU nf-tests #1011: Commit a4ed3ab pushed by pinin4fjords
3m 5s dev
dev
3m 5s
Important! Template update for nf-core/tools v4.0.3 Run GPU nf-tests #1010: Pull request #1894 synchronize by pinin4fjords
1m 21s nf-core-template-merge-4.0.3
nf-core-template-merge-4.0.3
1m 21s
Merge pull request #1896 from nf-core/backmerge-security-patch-4.0.3 Run GPU nf-tests #1009: Commit 3897963 pushed by pinin4fjords
1m 38s dev
dev
1m 38s
chore: back-merge master security patch into dev Run GPU nf-tests #1008: Pull request #1896 opened by mashehu
1m 5s backmerge-security-patch-4.0.3
backmerge-security-patch-4.0.3
1m 5s
Remove vulnerable PR-comment artifact pattern Run GPU nf-tests #1007: Pull request #1895 opened by mashehu
1m 11s patch
patch
1m 11s
enable a pre-built bowtie2 index for rrna removal Run GPU nf-tests #1006: Pull request #1892 synchronize by emmanuel-tan
Action required emmanuel-tan:enhancement/rrna-bt-index
emmanuel-tan:enhancement/rrna-bt-index
Action required
enable a pre-built bowtie2 index for rrna removal Run GPU nf-tests #1004: Pull request #1892 opened by emmanuel-tan
Action required emmanuel-tan:enhancement/rrna-bt-index
emmanuel-tan:enhancement/rrna-bt-index
Action required
fix(gtffilter): add support for non-Ensembl GTF files. Run GPU nf-tests #1002: Pull request #1890 opened by kanishkanandhkumar
1m 6s kanishkanandhkumar:feature/non-ensembl-gtf-support
kanishkanandhkumar:feature/non-ensembl-gtf-support
1m 6s
fix(gtffilter): add support for non-Ensembl GTF biotype attributes (#1886) Run GPU nf-tests #1001: Pull request #1889 synchronize by kanishkanandhkumar
13m 6s kanishkanandhkumar:feature/non-ensembl-gtf-support
kanishkanandhkumar:feature/non-ensembl-gtf-support
13m 6s
fix(gtffilter): add support for non-Ensembl GTF biotype attributes (#1886) Run GPU nf-tests #1000: Pull request #1889 opened by kanishkanandhkumar
13m 46s kanishkanandhkumar:feature/non-ensembl-gtf-support
kanishkanandhkumar:feature/non-ensembl-gtf-support
13m 46s
docs: Simplify as_tibble syntax in usage example Run GPU nf-tests #999: Pull request #1888 opened by kbseah
Action required kbseah:patch-1
kbseah:patch-1
Action required
Merge pull request #1885 from pinin4fjords/fix/collect-ordering-deter… Run GPU nf-tests #998: Commit b6343cb pushed by pinin4fjords
57m 47s dev
dev
57m 47s
Bump quant_tximport_summarizedexperiment and quantify_rsem for deterministic collect() ordering Run GPU nf-tests #997: Pull request #1885 synchronize by pinin4fjords
4m 41s pinin4fjords:fix/collect-ordering-determinism
pinin4fjords:fix/collect-ordering-determinism
4m 41s
Bump quant_tximport_summarizedexperiment and quantify_rsem for deterministic collect() ordering Run GPU nf-tests #996: Pull request #1885 synchronize by pinin4fjords
24m 38s pinin4fjords:fix/collect-ordering-determinism
pinin4fjords:fix/collect-ordering-determinism
24m 38s
Bump quant_tximport_summarizedexperiment and quantify_rsem for deterministic collect() ordering Run GPU nf-tests #995: Pull request #1885 synchronize by pinin4fjords
24m 13s pinin4fjords:fix/collect-ordering-determinism
pinin4fjords:fix/collect-ordering-determinism
24m 13s
Bump quant_tximport_summarizedexperiment and quantify_rsem for deterministic collect() ordering Run GPU nf-tests #994: Pull request #1885 opened by pinin4fjords
39m 6s pinin4fjords:fix/collect-ordering-determinism
pinin4fjords:fix/collect-ordering-determinism
39m 6s
Deterministic tx2gene sample selection in quant_tximport_summarizedexperiment Run GPU nf-tests #993: Pull request #1875 synchronize by pinin4fjords
27m 47s tx2gene-deterministic-resume
tx2gene-deterministic-resume
27m 47s
Merge pull request #1884 from nf-core/update-trimgalore Run GPU nf-tests #992: Commit 9b04429 pushed by pinin4fjords
50m 14s dev
dev
50m 14s
Update trimgalore module to 2.3.0 Run GPU nf-tests #991: Pull request #1884 synchronize by pinin4fjords
58m 16s update-trimgalore
update-trimgalore
58m 16s