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test: dedupe pipeline-level tests without losing coverage #745

test: dedupe pipeline-level tests without losing coverage

test: dedupe pipeline-level tests without losing coverage #745

Triggered via pull request April 22, 2026 15:38
Status Cancelled
Total duration 19m 14s
Artifacts

nf-test-gpu.yml

on: pull_request
Get Shards
20s
Get Shards
Matrix: nf-test-gpu
confirm-pass-gpu
5s
confirm-pass-gpu
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8 errors and 13 warnings
GPU Test | docker | 2 | 25.04.3 | pipeline
Process completed with exit code 1.
GPU Test | docker | 1 | 25.04.3 | pipeline
Process completed with exit code 1.
GPU Test | singularity | 1 | 25.04.3 | pipeline
Canceling since a higher priority waiting request for Run GPU nf-tests-1812 exists
GPU Test | singularity | 1 | 25.04.3 | pipeline
The operation was canceled.
GPU Test | singularity | 2 | 25.04.3 | pipeline
Canceling since a higher priority waiting request for Run GPU nf-tests-1812 exists
GPU Test | singularity | 2 | 25.04.3 | pipeline
The operation was canceled.
confirm-pass-gpu
Process completed with exit code 1.
Run GPU nf-tests
Canceling since a higher priority waiting request for Run GPU nf-tests-1812 exists
Get Shards
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@0ad4b8fadaa221de15dcec353f45205ec38ea70b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
GPU Test | docker | 2 | 25.04.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
GPU Test | docker | 2 | 25.04.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
GPU Test | docker | 2 | 25.04.3 | pipeline
Runner Version 2.331.0 will no longer be able to run jobs on April 29, 2026, please update your runner version.
GPU Test | docker | 1 | 25.04.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
GPU Test | docker | 1 | 25.04.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
GPU Test | docker | 1 | 25.04.3 | pipeline
Runner Version 2.331.0 will no longer be able to run jobs on April 29, 2026, please update your runner version.
GPU Test | singularity | 1 | 25.04.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
GPU Test | singularity | 1 | 25.04.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
GPU Test | singularity | 1 | 25.04.3 | pipeline
Runner Version 2.331.0 will no longer be able to run jobs on April 29, 2026, please update your runner version.
GPU Test | singularity | 2 | 25.04.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
GPU Test | singularity | 2 | 25.04.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
GPU Test | singularity | 2 | 25.04.3 | pipeline
Runner Version 2.331.0 will no longer be able to run jobs on April 29, 2026, please update your runner version.