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Split PREPARE_GENOME into REFERENCES + INDICES subworkflows #900

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Split PREPARE_GENOME into REFERENCES + INDICES subworkflows

Split PREPARE_GENOME into REFERENCES + INDICES subworkflows #900

Run time

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Job Run time
Get Shards
23s
GPU Test | docker | 1 | 25.04.3 | pipeline
22m 4s
GPU Test | singularity | 1 | 25.04.3 | pipeline
24m 34s
GPU Test | singularity | 2 | 25.04.3 | pipeline
22m 21s
GPU Test | docker | 2 | 25.04.3 | pipeline
16m 3s
confirm-pass-gpu
5s
1h 25m 30s