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Update trimgalore module to 2.3.0 #991

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Update trimgalore module to 2.3.0

Update trimgalore module to 2.3.0 #991

Triggered via pull request July 15, 2026 14:52
@pinin4fjordspinin4fjords
synchronize #1884
update-trimgalore
Status Success
Total duration 58m 16s
Artifacts –

nf-test-gpu.yml

on: pull_request
Get Shards
22s
Get Shards
Matrix: nf-test-gpu
confirm-pass-gpu
6s
confirm-pass-gpu
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14 warnings
GPU Test | singularity | 2 | 25.10.4 | pipeline
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
GPU Test | singularity | 2 | 25.10.4 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
GPU Test | singularity | 2 | 25.10.4 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
LaunchWarning
Dropped incompatible instance families: g6.2xlarge (no such instance type exists in this region). Proceeding with: g5.2xlarge.
GPU Test | docker | 2 | 25.10.4 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
GPU Test | docker | 2 | 25.10.4 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
LaunchWarning
Dropped incompatible instance families: g6.2xlarge (no such instance type exists in this region). Proceeding with: g5.2xlarge.
GPU Test | docker | 1 | 25.10.4 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
GPU Test | docker | 1 | 25.10.4 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
LaunchWarning
Dropped incompatible instance families: g6.2xlarge (no such instance type exists in this region). Proceeding with: g5.2xlarge.
GPU Test | singularity | 1 | 25.10.4 | pipeline
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
GPU Test | singularity | 1 | 25.10.4 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
GPU Test | singularity | 1 | 25.10.4 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
LaunchWarning
Dropped incompatible instance families: g6.2xlarge (no such instance type exists in this region). Proceeding with: g5.2xlarge.