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nf-test-gpu.yml
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Deterministic tx2gene sample selection in quant_tximport_summarizedexperiment Run GPU nf-tests #990: Pull request #1875 synchronize by pinin4fjords
47m 18s tx2gene-deterministic-resume
tx2gene-deterministic-resume
47m 18s
Update trimgalore module to 2.3.0 Run GPU nf-tests #989: Pull request #1884 synchronize by pinin4fjords
1h 0m 28s update-trimgalore
update-trimgalore
1h 0m 28s
Merge pull request #1883 from nf-core/tximport-jq-dep Run GPU nf-tests #988: Commit 66ff017 pushed by pinin4fjords
2h 27m 16s dev
dev
2h 27m 16s
Pull in nf-core/modules#12362 for tximeta/tximport Run GPU nf-tests #987: Pull request #1883 synchronize by pinin4fjords
41m 25s tximport-jq-dep
tximport-jq-dep
41m 25s
Update trimgalore module to 2.3.0 Run GPU nf-tests #986: Pull request #1884 opened by pinin4fjords
1h 1m 49s update-trimgalore
update-trimgalore
1h 1m 49s
Pull in nf-core/modules#12362 for tximeta/tximport Run GPU nf-tests #985: Pull request #1883 synchronize by pinin4fjords
33m 4s tximport-jq-dep
tximport-jq-dep
33m 4s
Pull in nf-core/modules#12362 for tximeta/tximport Run GPU nf-tests #984: Pull request #1883 opened by pinin4fjords
5m 54s tximport-jq-dep
tximport-jq-dep
5m 54s
Pass --skip-dup-check to RustQC when --with_umi is set Run GPU nf-tests #983: Pull request #1882 synchronize by FelixKrueger
1m 48s FelixKrueger:felix/rustqc-umi-skip-dup-check
FelixKrueger:felix/rustqc-umi-skip-dup-check
1m 48s
Pass --skip-dup-check to RustQC when --with_umi is set Run GPU nf-tests #982: Pull request #1882 opened by FelixKrueger
1m 9s FelixKrueger:felix/rustqc-umi-skip-dup-check
FelixKrueger:felix/rustqc-umi-skip-dup-check
1m 9s
Fix: Make CUSTOM_RSEMMERGECOUNTS input deterministic to improve caching Run GPU nf-tests #981: Pull request #1880 opened by kanishkanandhkumar
1d 0h 1m 22s kanishkanandhkumar:dev
kanishkanandhkumar:dev
1d 0h 1m 22s
Update help text for contaminant screening input Run GPU nf-tests #980: Commit 02dfe8b pushed by EladH1
1m 9s dev
dev
1m 9s
Contaminant screening input -Add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #979: Pull request #1878 synchronize by EladH1
28m 51s contaminant-screening-input
contaminant-screening-input
28m 51s
Contaminant screening input -Add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #978: Pull request #1878 synchronize by EladH1
19m 57s contaminant-screening-input
contaminant-screening-input
19m 57s
Contaminant screening input -Add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #977: Pull request #1878 synchronize by EladH1
30m 44s contaminant-screening-input
contaminant-screening-input
30m 44s
Contaminant screening input -Add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #976: Pull request #1878 synchronize by EladH1
53s contaminant-screening-input
contaminant-screening-input
53s
Contaminant screening input -Add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #975: Pull request #1878 synchronize by EladH1
22s contaminant-screening-input
contaminant-screening-input
22s
Contaminant screening input -Add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #974: Pull request #1878 synchronize by EladH1
2m 19s contaminant-screening-input
contaminant-screening-input
2m 19s
Contaminant screening input -Add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #973: Pull request #1878 synchronize by EladH1
1m 13s contaminant-screening-input
contaminant-screening-input
1m 13s
Contaminant screening input -Add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #972: Pull request #1878 synchronize by EladH1
33s contaminant-screening-input
contaminant-screening-input
33s
Contaminant screening input -Add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #971: Pull request #1878 opened by EladH1
2m 1s contaminant-screening-input
contaminant-screening-input
2m 1s
feat: add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #970: Pull request #1877 synchronize by EladH1
48m 34s EladH1:minimal-contaminant-screening
EladH1:minimal-contaminant-screening
48m 34s
feat: add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #969: Pull request #1877 opened by EladH1
25m 57s EladH1:minimal-contaminant-screening
EladH1:minimal-contaminant-screening
25m 57s
Deterministic tx2gene sample selection in quant_tximport_summarizedexperiment Run GPU nf-tests #968: Pull request #1875 synchronize by pinin4fjords
1m 19s tx2gene-deterministic-resume
tx2gene-deterministic-resume
1m 19s
Add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #967: Pull request #1874 synchronize by EladH1
48m 2s contaminant-screening-input
contaminant-screening-input
48m 2s
Add trim_only and raw options to --contaminant_screening_input Run GPU nf-tests #966: Pull request #1874 synchronize by EladH1
24m 24s contaminant-screening-input
contaminant-screening-input
24m 24s