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bump nf-schema to 2.4.1 #3533

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bump nf-schema to 2.4.1 #3533

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6ec32ed
bump nf-schema to 2.4.0
nvnieuwk Apr 10, 2025
3c21928
add PR number to changelog
nvnieuwk Apr 10, 2025
a628c8e
remove tmp files
nvnieuwk Apr 10, 2025
3cb6cb0
fix lint tests
nvnieuwk Apr 10, 2025
aaa4359
update ci nextflow version of tools
nvnieuwk Apr 10, 2025
88c29ff
fix version typo
nvnieuwk Apr 10, 2025
63a31c4
Update CHANGELOG.md
nvnieuwk Apr 10, 2025
4e31eb4
Update nf_core/pipeline-template/nextflow.config
nvnieuwk Apr 10, 2025
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2 changes: 1 addition & 1 deletion .github/workflows/create-lint-wf.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -38,7 +38,7 @@ jobs:
strategy:
matrix:
NXF_VER:
- "24.04.2"
- "24.10.0"
- "latest-everything"
steps:
- name: go to subdirectory and change nextflow workdir
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2 changes: 1 addition & 1 deletion .github/workflows/create-test-wf.yml
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Expand Up @@ -39,7 +39,7 @@ jobs:
strategy:
matrix:
NXF_VER:
- "24.04.2"
- "24.10.0"
- "latest-everything"
steps:
- name: go to working directory
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2 changes: 2 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -11,6 +11,8 @@
- Run awsfulltest after release, and with dev revision on PRs to master ([#3485](https://github.com/nf-core/tools/pull/3485))
- Add .nftignore to trigger list ([#3508](https://github.com/nf-core/tools/pull/3508))
- Include the centralized nf-core configs also in offline mode, if a local copy is available. ([#3491](https://github.com/nf-core/tools/pull/3491))
- Bump nf-schema to `2.4.0` ([#3533](https://github.com/nf-core/tools/pull/3533))
- Bump the minimal Nextflow version to `24.10.0` ([#3533](https://github.com/nf-core/tools/pull/3533))

### Linting

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2 changes: 1 addition & 1 deletion nf_core/pipeline-template/.github/workflows/nf-test.yml
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Expand Up @@ -91,7 +91,7 @@ jobs:
- isMain: false
profile: "singularity"
NXF_VER:
- "24.04.2"
- "24.10.0"
- "latest-everything"
env:
NXF_ANSI_LOG: false
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2 changes: 1 addition & 1 deletion nf_core/pipeline-template/README.md
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Expand Up @@ -20,7 +20,7 @@
[![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.XXXXXXX-1073c8?labelColor=000000)](https://doi.org/10.5281/zenodo.XXXXXXX)
[![nf-test](https://img.shields.io/badge/unit_tests-nf--test-337ab7.svg)](https://www.nf-test.com)

[![Nextflow](https://img.shields.io/badge/version-%E2%89%A524.04.2-green?style=flat&logo=nextflow&logoColor=white&color=%230DC09D&link=https%3A%2F%2Fnextflow.io)](https://www.nextflow.io/)
[![Nextflow](https://img.shields.io/badge/version-%E2%89%A524.10.0-green?style=flat&logo=nextflow&logoColor=white&color=%230DC09D&link=https%3A%2F%2Fnextflow.io)](https://www.nextflow.io/)
[![nf-core template version](https://img.shields.io/badge/nf--core_template-{{ nf_core_version }}-green?style=flat&logo=nfcore&logoColor=white&color=%2324B064&link=https%3A%2F%2Fnf-co.re)](https://github.com/nf-core/tools/releases/tag/{{ nf_core_version }})
[![run with conda](http://img.shields.io/badge/run%20with-conda-3EB049?labelColor=000000&logo=anaconda)](https://docs.conda.io/en/latest/)
[![run with docker](https://img.shields.io/badge/run%20with-docker-0db7ed?labelColor=000000&logo=docker)](https://www.docker.com/)
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4 changes: 2 additions & 2 deletions nf_core/pipeline-template/nextflow.config
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Expand Up @@ -291,15 +291,15 @@ manifest {
description = """{{ description }}"""
mainScript = 'main.nf'
defaultBranch = '{{ default_branch }}'
nextflowVersion = '!>=24.04.2'
nextflowVersion = '!>=24.10.0'
version = '{{ version }}'
doi = ''
}

{% if nf_schema -%}
// Nextflow plugins
plugins {
id 'nf-schema@2.3.0' // Validation of pipeline parameters and creation of an input channel from a sample sheet
id 'nf-schema@2.4.0' // Validation of pipeline parameters and creation of an input channel from a sample sheet
}

validation {
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