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Issues list

Enable longitudinal structural analysis effort:medium Estimated medium effort task freesurfer FreeSurfer related improvements and issues impact:high Estimated high impact task
#429 opened Nov 15, 2023 by ChristianNSchmitz
1
13
Replace hardcoded t1w with anat for multi-modality workflows / nodes effort:medium Estimated medium effort task impact:low Estimated low impact task maintenance
#320 opened Jan 26, 2023 by mgxd
1
Skull-stripping failure on Quickshear-defaced images? bug Something isn't working effort:medium Estimated medium effort task impact:medium Estimated medium impact task skull-stripping Brain extraction problems
#229 opened Sep 24, 2020 by effigies
@oesteban
5
More forgiving FreeSurfer check effort:medium Estimated medium effort task enhancement New feature or request impact:low Estimated low impact task
#226 opened Aug 21, 2020 by effigies
1
Incosistent autorecon errors bug Something isn't working effort:medium Estimated medium effort task freesurfer FreeSurfer related improvements and issues impact:high Estimated high impact task
#130 opened Oct 9, 2019 by JoffJones 0.8.0
3
Multi-session datasets with multiple lesion masks effort:medium Estimated medium effort task impact:low Estimated low impact task
#58 opened Mar 8, 2019 by effigies
16
Poor T1 MNI normalization bug Something isn't working effort:medium Estimated medium effort task impact:low Estimated low impact task
#55 opened Feb 20, 2019 by oliver-xie 0.8.0
8
FLAIR in BIDS input data not used for Freesurfer surface recon-all bug Something isn't working effort:medium Estimated medium effort task freesurfer FreeSurfer related improvements and issues impact:low Estimated low impact task
#33 opened Sep 12, 2018 by oesteban 0.8.0
2
freesurfer crash because cannot create symbolic links in CIFS bug Something isn't working effort:medium Estimated medium effort task freesurfer FreeSurfer related improvements and issues impact:low Estimated low impact task
#30 opened Jul 23, 2018 by danielkimmel 0.8.0
2
fsaverage_sym as possible output space? effort:medium Estimated medium effort task freesurfer FreeSurfer related improvements and issues impact:low Estimated low impact task
#26 opened May 24, 2018 by spitschan
4
Add --lesion-mask-ds option to explicitly trigger masking updates effort:medium Estimated medium effort task impact:medium Estimated medium impact task skull-stripping Brain extraction problems
#42 opened May 4, 2018 by effigies
1
Add visualizations of surface coregistration (to fsaverage) effort:medium Estimated medium effort task freesurfer FreeSurfer related improvements and issues impact:medium Estimated medium impact task
#20 opened Feb 13, 2018 by chrisgorgo 0.8.0
3
Surface reconstruction failure effort:medium Estimated medium effort task freesurfer FreeSurfer related improvements and issues impact:medium Estimated medium impact task
#19 opened Dec 19, 2017 by chrisgorgo
2
Merge multiple T2w images? effort:medium Estimated medium effort task impact:low Estimated low impact task multiple images Multiple T1w or T2w images (e.g., longitudinal, multisession, etc)
#13 opened Sep 26, 2017 by effigies 0.8.0
@mgxd
2
Subcortical surface meshes effort:medium Estimated medium effort task impact:low Estimated low impact task
#9 opened Jan 13, 2017 by effigies
3
Quality control for FreeSurfer ROIs (parcellations) effort:medium Estimated medium effort task freesurfer FreeSurfer related improvements and issues impact:medium Estimated medium impact task
#10 opened Jan 13, 2017 by effigies 0.8.0
ProTip! What’s not been updated in a month: updated:<2025-04-22.