Skip to content

Navigation Menu

Appearance settings

nobias-fht

- AI CODE CREATION
  GitHub CopilotWrite better code with AI
  GitHub Copilot appDirect agents from issue to merge
  MCP Registry^NewIntegrate external tools
- DEVELOPER WORKFLOWS
  ActionsAutomate any workflow
  CodespacesInstant dev environments
  IssuesPlan and track work
  Code ReviewManage code changes
- APPLICATION SECURITY
  GitHub Advanced SecurityFind and fix vulnerabilities
  Code securitySecure your code as you build
  Secret protectionStop leaks before they start
- EXPLORE
  Why GitHub
  Documentation
  Blog
  Changelog
  Marketplace
View all features
- BY COMPANY SIZE
  Enterprises
  Small and medium teams
  Startups
  Nonprofits
- BY USE CASE
  App Modernization
  DevSecOps
  DevOps
  CI/CD
  View all use cases
- BY INDUSTRY
  Healthcare
  Financial services
  Manufacturing
  Government
  View all industries
View all solutions
- EXPLORE BY TOPIC
  AI
  Software Development
  DevOps
  Security
  View all topics
- EXPLORE BY TYPE
  Customer stories
  Events & webinars
  Ebooks & reports
  Business insights
  GitHub Skills
- SUPPORT & SERVICES
  Documentation
  Customer support
  Community forum
  Trust center
  Partners
View all resources
- COMMUNITY
  GitHub SponsorsFund open source developers
- PROGRAMS
  Security Lab
  Maintainer Community
  Accelerator
  GitHub Stars
  Archive Program
- REPOSITORIES
  Topics
  Trending
  Collections
- ENTERPRISE SOLUTIONS
  Enterprise platformAI-powered developer platform
- AVAILABLE ADD-ONS
  GitHub Advanced SecurityEnterprise-grade security features
  Copilot for BusinessEnterprise-grade AI features
  Premium SupportEnterprise-grade 24/7 support
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

Appearance settings

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

nobias-fht

Overview
Repositories
Projects
Packages
People

More

Overview
Repositories
Projects
Packages
People

README.md

Welcome to the National Facility for Bioimage Analysis based at Human Technopole in Milan, Italy.

Pinned Loading

advanced-scripting advanced-scripting Public

ImageJ Macro 2
pasteur_n2v pasteur_n2v Public

Instructions for DL restoration workshop.

Repositories

Loading

Type

Select type

All Public Sources Forks Archived Mirrors Templates

Language

Select language

All ImageJ Macro Jupyter Notebook Python Shell

Sort

Select order

Last updated Name Stars

Showing 10 of 19 repositories

bad_code_example Public

nobias-fht/bad_code_example’s past year of commit activity

Jupyter Notebook 0 0 0 0 Updated Jun 10, 2026
organoid-cell-spots Public
Repo for spot segmentation in organoids

nobias-fht/organoid-cell-spots’s past year of commit activity

Python 0 0 0 0 Updated Apr 22, 2026
cellpose_practical Public
Example notebook for EBI cellpose practical

nobias-fht/cellpose_practical’s past year of commit activity

Jupyter Notebook 0 0 0 0 Updated Mar 16, 2026
testa-organoid-nuclei Public
Nuclear Segmentation on organoid slices

nobias-fht/testa-organoid-nuclei’s past year of commit activity

Python 0 BSD-3-Clause 0 0 0 Updated Feb 18, 2026
harschnitz-organoid-nuclei Public
Nuclear segmentation and quantification of organoid slices

nobias-fht/harschnitz-organoid-nuclei’s past year of commit activity

Python 0 BSD-3-Clause 0 0 0 Updated Jan 20, 2026
kymograph-synthesis Public
A repository for generating synthetic kymographs

nobias-fht/kymograph-synthesis’s past year of commit activity

Python 1 BSD-3-Clause 0 0 0 Updated Dec 5, 2025
cell_boundaries Public

nobias-fht/cell_boundaries’s past year of commit activity

Python 0 BSD-3-Clause 0 0 0 Updated Nov 27, 2025
protrusion-splitting Public
Repository for Kalebic protrusion splitting project

nobias-fht/protrusion-splitting’s past year of commit activity

Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Apr 23, 2025
facility-sop Public
SOPs for human technopole image analysis unit

nobias-fht/facility-sop’s past year of commit activity

0 BSD-3-Clause 0 0 0 Updated Feb 10, 2025
cellmap_pipelines Public
Utilities to run CellMap training and fine-tuning

nobias-fht/cellmap_pipelines’s past year of commit activity

Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Dec 18, 2024

View all repositories

People

Top languages

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Most used topics

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Footer

© 2026 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Community
Docs
Contact

You can’t perform that action at this time.