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@nobias-fht

nobias-fht

README.md

Welcome to the National Facility for Bioimage Analysis based at Human Technopole in Milan, Italy.

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  1. advanced-scripting advanced-scripting Public

    ImageJ Macro 2

  2. pasteur_n2v pasteur_n2v Public

    Instructions for DL restoration workshop.

Repositories

Showing 10 of 15 repositories
  • testa-organoid-nuclei Public

    Nuclear Segmentation on organoid slices

    nobias-fht/testa-organoid-nuclei’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Apr 28, 2025
  • protrusion-splitting Public

    Repository for Kalebic protrusion splitting project

    nobias-fht/protrusion-splitting’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Apr 23, 2025
  • kymograph-synthesis Public

    A repository for generating synthetic kymographs

    nobias-fht/kymograph-synthesis’s past year of commit activity
    Python 1 0 0 0 Updated Mar 19, 2025
  • facility-sop Public

    SOPs for human technopole image analysis unit

    nobias-fht/facility-sop’s past year of commit activity
    0 BSD-3-Clause 0 0 0 Updated Feb 10, 2025
  • cellmap_pipelines Public

    Utilities to run CellMap training and fine-tuning

    nobias-fht/cellmap_pipelines’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Dec 18, 2024
  • harschnitz-organoid-nuclei Public

    Nuclear segmentation and quantification of organoid slices

    nobias-fht/harschnitz-organoid-nuclei’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Dec 3, 2024
  • erdmann-cell-counting Public

    Counting of DAPI-stained cells embedded in gel

    nobias-fht/erdmann-cell-counting’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Sep 5, 2024
  • chabot_2024 Public

    Radial shape analysis for Chabot 2024

    nobias-fht/chabot_2024’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Jul 15, 2024
  • headless_fiji Public

    A proof of concept pipeline to download, update and run Fiji in headless mode.

    nobias-fht/headless_fiji’s past year of commit activity
    Shell 2 BSD-3-Clause 0 0 0 Updated Jun 28, 2024
  • advanced-scripting Public
    nobias-fht/advanced-scripting’s past year of commit activity
    ImageJ Macro 2 BSD-3-Clause 0 0 0 Updated Jun 11, 2024
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