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viash test on: pull_request

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viash_test (make_params, files, src/files/make_params/config.vsh.yaml, src/files/make_params/, r_...

viash_test (pad_tokenize, scgpt, src/scgpt/pad_tokenize/config.vsh.yaml, src/scgpt/pad_tokenize/,...

viash_test (embedding, scgpt, src/scgpt/embedding/config.vsh.yaml, src/scgpt/embedding/, python_s...

viash_test (binning, scgpt, src/scgpt/binning/config.vsh.yaml, src/scgpt/binning/, python_script,...

viash_test (cell_type_annotation, scgpt, src/scgpt/cell_type_annotation/config.vsh.yaml, src/scgp...

viash_test (cellbender_remove_background, correction, src/correction/cellbender_remove_background...

viash_test (bcl2fastq, demux, src/demux/bcl2fastq/config.vsh.yaml, src/demux/bcl2fastq/, bash_scr...

viash_test (scvelo, velocity, src/velocity/scvelo/config.vsh.yaml, src/velocity/scvelo/, python_s...

viash_test (score_genes_scanpy, feature_annotation, src/feature_annotation/score_genes_scanpy/con...

viash_test (score_genes_cell_cycle_scanpy, feature_annotation, src/feature_annotation/score_genes...

viash_test (highly_variable_features_scanpy, feature_annotation, src/feature_annotation/highly_va...

viash_test (move_layer, transform, src/transform/move_layer/config.vsh.yaml, src/transform/move_l...

viash_test (clr, transform, src/transform/clr/config.vsh.yaml, src/transform/clr/, python_script,...

viash_test (normalize_total, transform, src/transform/normalize_total/config.vsh.yaml, src/transf...

viash_test (delete_layer, transform, src/transform/delete_layer/config.vsh.yaml, src/transform/de...

viash_test (log1p, transform, src/transform/log1p/config.vsh.yaml, src/transform/log1p/, python_s...

viash_test (tfidf, transform, src/transform/tfidf/config.vsh.yaml, src/transform/tfidf/, python_s...

viash_test (join_uns_to_obs, metadata, src/metadata/join_uns_to_obs/config.vsh.yml, src/metadata/...

viash_test (join_csv, metadata, src/metadata/join_csv/config.vsh.yml, src/metadata/join_csv/, pyt...

viash_test (add_id, metadata, src/metadata/add_id/config.vsh.yaml, src/metadata/add_id/, python_s...

viash_test (grep_annotation_column, metadata, src/metadata/grep_annotation_column/config.vsh.yaml...

viash_test (move_obsm_to_obs, metadata, src/metadata/move_obsm_to_obs/config.vsh.yaml, src/metada...

viash_test (svm_annotation, annotate, src/annotate/svm_annotation/config.vsh.yaml, src/annotate/s...

viash_test (scanvi, annotate, src/annotate/scanvi/config.vsh.yaml, src/annotate/scanvi/, python_s...

viash_test (split_h5mu, dataflow, src/dataflow/split_h5mu/config.vsh.yaml, src/dataflow/split_h5m...

viash_test (concatenate_h5mu, dataflow, src/dataflow/concatenate_h5mu/config.vsh.yaml, src/datafl...

viash_test (from_h5mu_to_h5ad, convert, src/convert/from_h5mu_to_h5ad/config.vsh.yaml, src/conver...

viash_test (from_h5ad_to_h5mu, convert, src/convert/from_h5ad_to_h5mu/config.vsh.yaml, src/conver...

viash_test (compress_h5mu, compression, src/compression/compress_h5mu/config.vsh.yaml, src/compre...

viash_test (densmap, dimred, src/dimred/densmap/config.vsh.yaml, src/dimred/densmap/, python_scri...

viash_test (pca, dimred, src/dimred/pca/config.vsh.yaml, src/dimred/pca/, python_script, dimred/pca)

viash_test (tsne, dimred, src/dimred/tsne/config.vsh.yaml, src/dimred/tsne/, python_script, dimre...

viash_test (umap, dimred, src/dimred/umap/config.vsh.yaml, src/dimred/umap/, python_script, dimre...

viash_test (scvi, integrate, src/integrate/scvi/config.vsh.yaml, src/integrate/scvi/, python_scri...

viash_test (scarches, integrate, src/integrate/scarches/config.vsh.yaml, src/integrate/scarches/,...

viash_test (harmonypy, integrate, src/integrate/harmonypy/config.vsh.yaml, src/integrate/harmonyp...

viash_test (scanorama, integrate, src/integrate/scanorama/config.vsh.yaml, src/integrate/scanoram...

viash_test (lianapy, interpret, src/interpret/lianapy/config.vsh.yaml, src/interpret/lianapy/, py...

viash_test (leiden, cluster, src/cluster/leiden/config.vsh.yaml, src/cluster/leiden/, python_scri...

viash_test (remove_modality, filter, src/filter/remove_modality/config.vsh.yaml, src/filter/remov...

viash_test (subset_h5mu, filter, src/filter/subset_h5mu/config.vsh.yaml, src/filter/subset_h5mu/,...

viash_test (delimit_fraction, filter, src/filter/delimit_fraction/config.vsh.yaml, src/filter/del...

viash_test (do_filter, filter, src/filter/do_filter/config.vsh.yaml, src/filter/do_filter/, pytho...

viash_test (filter_with_scrublet, filter, src/filter/filter_with_scrublet/config.vsh.yaml, src/fi...

viash_test (intersect_obs, filter, src/filter/intersect_obs/config.vsh.yaml, src/filter/intersect...

viash_test (subset_obsp, filter, src/filter/subset_obsp/config.vsh.yaml, src/filter/subset_obsp/,...

viash_test (filter_with_counts, filter, src/filter/filter_with_counts/config.vsh.yaml, src/filter...

viash_test (find_neighbors, neighbors, src/neighbors/find_neighbors/config.vsh.yaml, src/neighbor...

viash_test (bbknn, neighbors, src/neighbors/bbknn/config.vsh.yaml, src/neighbors/bbknn/, python_s...

viash_test (bd_rhapsody, mapping, src/mapping/bd_rhapsody/config.vsh.yaml, src/mapping/bd_rhapsod...

viash_test (cellranger_count_split, mapping, src/mapping/cellranger_count_split/config.vsh.yaml, ...

viash_test (calculate_atac_qc_metrics, qc, src/qc/calculate_atac_qc_metrics/config.vsh.yaml, src/...

viash_test (calculate_qc_metrics, qc, src/qc/calculate_qc_metrics/config.vsh.yaml, src/qc/calcula...

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