Repositories list

• Osteo_atlas

  Public
  Jupyter Notebook

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  MIT License

  •1•1•0•0•Updated Mar 26, 2026Mar 26, 2026

• rrrSingleCellUtils

  Public
  Single cell analysis utility functions for the Ryan Roberts lab

  R

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  Other

  •3•3•0•1•Updated Feb 26, 2026Feb 26, 2026

• NCH_Coder_Upgrade

  Public
  Code and guides for the SCRGOT Coder Upgrade single cell analysis workshop

  educationbioinformaticssingle-cell-rna-seq+ 3

  educationbioinformaticssingle-cell-rna-seqsingle-cell-analysisspatial-transcriptomicssingle-cell-multiomics

  R

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  Creative Commons Zero v1.0 Universal

  •14•2•0•0•Updated Feb 10, 2026Feb 10, 2026

• 24_validate_snvs

  Public
  HTML

  •0•0•0•0•Updated Feb 5, 2026Feb 5, 2026

• scanBit

  Public
  R

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  Other

  •0•2•0•0•Updated Jan 29, 2026Jan 29, 2026

• epithelial

  Public
  HTML

  •0•0•0•0•Updated Apr 24, 2025Apr 24, 2025

• oHSV-trabectedin

  Public
  R

  •1•0•0•0•Updated Dec 3, 2024Dec 3, 2024

• stashPlot

  Public
  R

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  Other

  •0•0•0•0•Updated Nov 19, 2024Nov 19, 2024

• CellTypeAnnRefs

  Public
  scRNA-seq cell type annotation reference builds

  MIT License

  •0•0•0•0•Updated Nov 4, 2024Nov 4, 2024

• MCL1_early_met_survival

  Public
  HTML

  •0•0•0•0•Updated Oct 3, 2023Oct 3, 2023

• 2023CoderUpgrade

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  Materials for the Nationwide Children's 2023 Coder Upgrade, a single-cell analysis coding boot camp run by SCRGOT (the Single Cell Research Group for Omics Tec…

  HTML

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  Creative Commons Zero v1.0 Universal

  •8•0•0•0•Updated May 24, 2023May 24, 2023

• OSHetero2021

  Public
  Files supporting data analysis for the heterogeneity in osteosarcoma tissue tropism paper (Sanjana lead)

  HTML

  •4•1•1•0•Updated Mar 23, 2023Mar 23, 2023

• sc-OsteoCNAs

  Public
  HTML

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  BSD 3-Clause "New" or "Revised" License

  •1•0•0•0•Updated Nov 2, 2022Nov 2, 2022