Skip to content

@nextflow-io nextflow-io

Change the repository type filter

All

    Repositories list

    98 repositories

    • nextflow

      Public
      A DSL for data-driven computational pipelines
      dockergroovyhelloawscloudpipelinehpcreproducible-researchworkflow-engineslurm
      Groovy
      •
      Apache License 2.0
      •679•2.9k•464•75•Updated Apr 17, 2025Apr 17, 2025

    • nf-ga4gh

      Public
      GA4GH plugin for Nextflow
      Java
      •
      Apache License 2.0
      •1•2•6•1•Updated Apr 16, 2025Apr 16, 2025

    • summit-website

      Public
      TypeScript
      •5•2•1•1•Updated Apr 16, 2025Apr 16, 2025

    • website

      Public
      Nextflow public web site
      HTML
      •105•8•2•8•Updated Apr 16, 2025Apr 16, 2025

    • nf-co2footprint

      Public
      [WIP] A Nextflow plugin to estimate the CO2 footprint of pipeline runs.
      Groovy
      •
      Apache License 2.0
      •9•19•21•7•Updated Apr 16, 2025Apr 16, 2025

    • training

      Public
      Nextflow training material
      traininglearningworkshopnextflowpipelinesteachingworkflowstutorial
      Nextflow
      •
      Other
      •195•162•36•14•Updated Apr 15, 2025Apr 15, 2025

    • rnaseq-nf

      Public
      A proof of concept of RNAseq pipeline
      genomicsnextflowrnaseq
      Nextflow
      •
      Apache License 2.0
      •108•77•6•6•Updated Apr 15, 2025Apr 15, 2025

    • language-server

      Public
      The Nextflow language server
      nextflowlanguage-server-protocol
      Java
      •
      Apache License 2.0
      •0•19•30•8•Updated Apr 14, 2025Apr 14, 2025

    • nextflow-plugin-gradle

      Public
      Gradle plugin for making Nextflow plugins
      Groovy
      •
      Apache License 2.0
      •0•1•1•0•Updated Apr 14, 2025Apr 14, 2025

    • plugins

      Public
      Nextflow plugins index repository
      27•3•3•1•Updated Apr 11, 2025Apr 11, 2025

    • vscode-language-nextflow

      Public
      Nextflow language support for Visual Studio Editor
      nextflowvscode-extension
      TypeScript
      •
      MIT License
      •16•34•8•3•Updated Apr 11, 2025Apr 11, 2025

    • schema-builder

      Public
      TypeScript
      •0•1•0•0•Updated Apr 10, 2025Apr 10, 2025

    • nf-schema

      Public
      Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines
      Groovy
      •
      Apache License 2.0
      •25•34•22•2•Updated Apr 10, 2025Apr 10, 2025

    • nf-tower

      Public
      Nextflow plugin providing the support for Tower
      Mozilla Public License 2.0
      •1•1•0•0•Updated Apr 8, 2025Apr 8, 2025

    • nf-prov

      Public
      Groovy
      •
      Apache License 2.0
      •13•30•10•2•Updated Apr 7, 2025Apr 7, 2025

    • nf-wave

      Public
      Wave provisioning containers plugin for Nextflow
      2•0•5•0•Updated Apr 5, 2025Apr 5, 2025

    • nf-console

      Public
      Console plugin for Nextflow
      Apache License 2.0
      •1•0•1•0•Updated Apr 5, 2025Apr 5, 2025

    • nf-azure

      Public
      Azure cloud plugin for Nextflow
      Apache License 2.0
      •1•2•0•0•Updated Mar 19, 2025Mar 19, 2025

    • nf-google

      Public
      Nextflow plugin providing the support for Google cloud
      Apache License 2.0
      •1•0•0•0•Updated Mar 18, 2025Mar 18, 2025

    • nf-amazon

      Public
      Amazon Web Services plugin for Nextflow
      Apache License 2.0
      •2•1•1•0•Updated Mar 18, 2025Mar 18, 2025

    • nf-hello

      Public template
      Nextflow plugin implementation skeleton
      Groovy
      •
      Apache License 2.0
      •28•10•4•2•Updated Mar 6, 2025Mar 6, 2025

    • k8s-fuse-plugin

      Public
      Kubernetes device plugin for using /dev/fuse without privileged flag
      Go
      •
      Apache License 2.0
      •0•11•4•0•Updated Feb 20, 2025Feb 20, 2025

    • nf-parquet

      Public
      Plugin implementing the support for Apache Parquet files (experimental)
      nextflowparquet
      Groovy
      •
      Apache License 2.0
      •1•3•0•0•Updated Feb 19, 2025Feb 19, 2025

    • schema-spec

      Public
      Specification of Nextflow schema
      Shell
      •
      Apache License 2.0
      •1•3•2•0•Updated Feb 18, 2025Feb 18, 2025

    • nf-nomad

      Public
      Hashicorp Nomad executor plugin for Nextflow
      Groovy
      •
      Apache License 2.0
      •4•3•8•1•Updated Jan 31, 2025Jan 31, 2025

    • nf-sqldb

      Public
      SQL support plugin for Nextflow
      Groovy
      •
      Apache License 2.0
      •1•26•7•6•Updated Jan 28, 2025Jan 28, 2025

    • doom

      Public
      A Nextflow pipeline to play Doom
      pipelinenextflowdoom
      Nextflow
      •
      GNU General Public License v3.0
      •0•10•2•0•Updated Jan 22, 2025Jan 22, 2025

    • nf-codecommit

      Public
      Amazon CodeCommit plugin for Nextflow
      1•0•0•0•Updated Jan 20, 2025Jan 20, 2025

    • nf-cloudcache

      Public
      Plugin implementing a cache metadata DB over cloud object storage
      Apache License 2.0
      •1•0•0•0•Updated Jan 20, 2025Jan 20, 2025

    • pf4j

      Public
      Plugin Framework for Java (PF4J)
      Java
      •
      Apache License 2.0
      •568•0•0•0•Updated Dec 27, 2024Dec 27, 2024