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Merged
pnkraemer merged 9 commits into from
Sep 5, 2025
Merged

Rename some tutorials to make them more accessible #822

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fa34122
Move the getting_started/ content to doc-toplevel to distinguish it f…
pnkraemer Sep 5, 2025
2fcc136
Rename transitioning_from_other_packages to migration_guide to avoid …
pnkraemer Sep 5, 2025
6717e11
Update the quickstart
pnkraemer Sep 5, 2025
0171e9d
Update the posterior_uncertainties script
pnkraemer Sep 5, 2025
daf0f14
Migrate over the remaining tutorials from last weeks demo
pnkraemer Sep 5, 2025
68c9670
Removed custom plotting style from tutorials to make code easier to c…
pnkraemer Sep 5, 2025
98f10db
Remove notebook imports from experiment plots
pnkraemer Sep 5, 2025
824f2a3
Rename physics-enhanced-regression to something more descriptive
pnkraemer Sep 5, 2025
757df03
Remove plotting from the quickstart to avoid dependency issues
pnkraemer Sep 5, 2025
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6 changes: 0 additions & 6 deletions docs/benchmarks/hires/plot.md
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Original file line number Diff line number Diff line change
Expand Up @@ -24,7 +24,6 @@ import jax.numpy as jnp
import matplotlib.pyplot as plt
import jax

from probdiffeq.util.doc_util import notebook

jax.config.update("jax_platform_name", "cpu")
```
Expand Down Expand Up @@ -91,11 +90,6 @@ def plot_solution(axis, ts, ys, yscale="linear"):
return axis
```

```python
plt.rcParams.update(notebook.plot_style())
plt.rcParams.update(notebook.plot_sizes())
```

```python
layout = [
["benchmark", "benchmark", "solution"],
Expand Down
7 changes: 0 additions & 7 deletions docs/benchmarks/lotkavolterra/plot.md
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Original file line number Diff line number Diff line change
Expand Up @@ -24,8 +24,6 @@ import jax.numpy as jnp
import matplotlib.pyplot as plt
import jax

from probdiffeq.util.doc_util import notebook

jax.config.update("jax_platform_name", "cpu")
```

Expand Down Expand Up @@ -95,11 +93,6 @@ def plot_solution(axis, ts, ys, yscale="linear"):
return axis
```

```python
plt.rcParams.update(notebook.plot_style())
plt.rcParams.update(notebook.plot_sizes())
```

```python
layout = [
["benchmark", "benchmark", "solution"],
Expand Down
6 changes: 0 additions & 6 deletions docs/benchmarks/pleiades/plot.md
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Original file line number Diff line number Diff line change
Expand Up @@ -24,8 +24,6 @@ import jax.numpy as jnp
import matplotlib.pyplot as plt
import jax

from probdiffeq.util.doc_util import notebook

jax.config.update("jax_platform_name", "cpu")
```

Expand Down Expand Up @@ -101,10 +99,6 @@ def plot_solution(axis, ys, yscale="linear"):
return axis
```

```python
plt.rcParams.update(notebook.plot_style())
plt.rcParams.update(notebook.plot_sizes())
```

```python
layout = [
Expand Down
7 changes: 0 additions & 7 deletions docs/benchmarks/taylor_fitzhughnagumo/plot.md
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Original file line number Diff line number Diff line change
Expand Up @@ -24,8 +24,6 @@ import jax.numpy as jnp
import matplotlib.pyplot as plt
import jax

from probdiffeq.util.doc_util import notebook

jax.config.update("jax_platform_name", "cpu")
```

Expand Down Expand Up @@ -88,11 +86,6 @@ def _adaptive_repeat(xs, ys):
return jnp.asarray(zs)
```

```python
plt.rcParams.update(notebook.plot_style())
plt.rcParams.update(notebook.plot_sizes())
```

```python
fig, (axis_perform, axis_compile) = plt.subplots(
ncols=2, figsize=(8, 3), dpi=150, sharex=True
Expand Down
6 changes: 0 additions & 6 deletions docs/benchmarks/taylor_node/plot.md
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Original file line number Diff line number Diff line change
Expand Up @@ -22,8 +22,6 @@ import jax.numpy as jnp
import matplotlib.pyplot as plt
import jax

from probdiffeq.util.doc_util import notebook

jax.config.update("jax_platform_name", "cpu")
```

Expand Down Expand Up @@ -85,10 +83,6 @@ def _adaptive_repeat(xs, ys):
return jnp.asarray(zs)
```

```python
plt.rcParams.update(notebook.plot_style())
plt.rcParams.update(notebook.plot_sizes())
```

```python
fig, (axis_perform, axis_compile) = plt.subplots(
Expand Down
6 changes: 0 additions & 6 deletions docs/benchmarks/taylor_pleiades/plot.md
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Original file line number Diff line number Diff line change
Expand Up @@ -24,7 +24,6 @@ import jax.numpy as jnp
import matplotlib.pyplot as plt
import jax

from probdiffeq.util.doc_util import notebook

jax.config.update("jax_platform_name", "cpu")
```
Expand Down Expand Up @@ -66,11 +65,6 @@ def plot_results(axis_compile, axis_perform, results):
return axis_compile, axis_perform
```

```python
plt.rcParams.update(notebook.plot_style())
plt.rcParams.update(notebook.plot_sizes())
```

```python
fig, (axis_perform, axis_compile) = plt.subplots(
ncols=2, dpi=150, sharex=True, figsize=(8, 3)
Expand Down
6 changes: 0 additions & 6 deletions docs/benchmarks/vanderpol/plot.md
View file
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Original file line number Diff line number Diff line change
Expand Up @@ -24,8 +24,6 @@ import jax.numpy as jnp
import matplotlib.pyplot as plt
import jax

from probdiffeq.util.doc_util import notebook

jax.config.update("jax_platform_name", "cpu")
```

Expand Down Expand Up @@ -114,10 +112,6 @@ def plot_solution(axis, ts, ys, yscale="linear"):
return axis
```

```python
plt.rcParams.update(notebook.plot_style())
plt.rcParams.update(notebook.plot_sizes())
```

```python
layout = [
Expand Down
0 docs/getting_started/choosing_a_solver.md → docs/choosing_a_solver.md
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0 ...dvanced/use_equinox_bounded_while_loop.py → docs/examples_advanced/equinox_while_loop.py
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