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[pre-commit.ci] pre-commit autoupdate #46

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Merged
Marius1311 merged 2 commits into from
Apr 10, 2025
Merged

[pre-commit.ci] pre-commit autoupdate #46

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316caa2
[pre-commit.ci] pre-commit autoupdate
pre-commit-ci[bot] Apr 7, 2025
bd432f8
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Apr 7, 2025
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2 changes: 1 addition & 1 deletion .pre-commit-config.yaml
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Expand Up @@ -15,7 +15,7 @@ repos:
hooks:
- id: pyproject-fmt
- repo: https://github.com/astral-sh/ruff-pre-commit
rev: v0.11.2
rev: v0.11.4
hooks:
- id: ruff
types_or: [python, pyi, jupyter]
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24 changes: 12 additions & 12 deletions CHANGELOG.md
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Expand Up @@ -17,45 +17,45 @@ and this project adheres to [Semantic Versioning][]. Full commit history is avai

#### Added

- Use `rapids_singlecell`, `cupy` and `cuml` to accelerate cluster marker computation on GPUs {pr}`37`.
- Add the possibility to softly enforce adherence to expected cell types {pr}`42`.
- Use `rapids_singlecell`, `cupy` and `cuml` to accelerate cluster marker computation on GPUs {pr}`37`.
- Add the possibility to softly enforce adherence to expected cell types {pr}`42`.

#### Changed

- Run cluster label harmonization also for a single sample {pr}`37`.
- Re-format prompts into a dataclass {pr}`42`.
- Run cluster label harmonization also for a single sample {pr}`37`.
- Re-format prompts into a dataclass {pr}`42`.

#### Fixed

- Fixed a bug with integer sample labels {pr}`37`.
- Fixed a bug with integer sample labels {pr}`37`.

### 0.1.3 (2025-02-07)

#### Added

- Added tests for the single-sample case {pr}`29`.
- Refer to issues and PRs with sphinx {pr}`30`.
- Added tests for the single-sample case {pr}`29`.
- Refer to issues and PRs with sphinx {pr}`30`.

#### Removed

- Removed `tenacity` for query retries {pr}`28`.
- Removed `tenacity` for query retries {pr}`28`.

#### Fixed

- Fixed `_get_annotation_summary_string` for the single-sample case {pr}`29`.
- Fixed the expected cell type marker test by adding additional marker genes {pr}`28`.
- Fixed `_get_annotation_summary_string` for the single-sample case {pr}`29`.
- Fixed the expected cell type marker test by adding additional marker genes {pr}`28`.

### 0.1.2 (2025-01-29)

#### Added

- Update the documentation, in particular the installation instructions.
- Update the documentation, in particular the installation instructions.

### 0.1.1 (2025-01-29)

#### Added

- Initial push to PyPI
- Initial push to PyPI

### 0.1.0 (2025-01-29)

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