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fix issues with image orientation for curio-seeker data#10302

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fix issues with image orientation for curio-seeker data#10302
Liuy12 wants to merge 1 commit into
satijalab:mainfrom
Liuy12:master

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@Liuy12

@Liuy12 Liuy12 commented Feb 9, 2026

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Fix issues with image orientation for curio-seeker data for the function LoadCurioSeeker. According to the source code from curio-seeker's pipeline, to match the tissue coordinates with the original image, the following is implemented:

  1. Flip x and y coordinates from the *MatchedBeadLocation.csv file.
  2. Update x to be max(x) - x

fix issues with image orientation for curio-seeker data for function LoadCurioSeeker
@anashen
anashen changed the base branch from master to main March 3, 2026 20:25
@anashen

anashen commented Mar 3, 2026

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Hi @Liuy12, are you able to provide an example for testing?

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2 participants