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Fix typos in Spatial Vignette Rmd#10320

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fix/spatial-vignette-typos
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Fix typos in Spatial Vignette Rmd#10320
YoukaiFromAccounting wants to merge 2 commits into
mainfrom
fix/spatial-vignette-typos

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This test PR was generated by GPT-5.3-Codex Default:

Summary

This PR fixes typo-level issues in vignettes/
spatial_vignette.Rmd to improve readability and reduce
confusion in the spatial analysis walkthrough. No code paths or
analysis logic were changed.

Changes

  • Fixed duplicated wording: which which -> which
  • Fixed malformed sctransform paper link to a valid DOI URL
  • Corrected grammar: works will -> works well
  • Corrected function name in prose:
    • FindSpatiallyVariables() ->
      FindSpatiallyVariableFeatures()
  • Corrected punctuation/formatting for method name:
    • method = 'markvariogram -> method = 'markvariogram'
  • Corrected spelling:
    • decovonlution -> deconvolution
    • specifiically -> specifically
  • Standardized capitalization:
    • visium -> Visium

Scope

  • Docs-only text edits in one file:
    • vignettes/spatial_vignette.Rmd

Copilot AI review requested due to automatic review settings March 6, 2026 18:19

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Pull request overview

Docs-only PR to improve clarity and correctness in the Spatial vignette by fixing typos and correcting references to functions/links used in the spatial analysis walkthrough.

Changes:

  • Fixes duplicated/incorrect wording and spelling (e.g., “which which”, “decovonlution”, “specifiically”).
  • Updates references/formatting in prose (e.g., FindSpatiallyVariableFeatures(), method = 'markvariogram' formatting).
  • Replaces the sctransform paper link with a DOI URL and standardizes capitalization (“Visium”).

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