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chore: update docker/metadata-action action to v6.2.0 CI #525: Pull request #170 opened by seqeralabs-renovate Bot
6m 51s renovate-autodiscover/docker-metadata-action-6.x
renovate-autodiscover/docker-metadata-action-6.x
6m 51s
chore: update docker/login-action action to v4.6.0 CI #524: Pull request #169 opened by seqeralabs-renovate Bot
5m 14s renovate-autodiscover/docker-login-action-4.x
renovate-autodiscover/docker-login-action-4.x
5m 14s
chore: update docker/build-push-action action to v7.3.0 CI #523: Pull request #168 opened by seqeralabs-renovate Bot
4m 37s renovate-autodiscover/docker-build-push-action-7.x
renovate-autodiscover/docker-build-push-action-7.x
4m 37s
chore: update dependency rust to 1.98 CI #522: Pull request #167 opened by seqeralabs-renovate Bot
4m 31s renovate-autodiscover/rust-1.x
renovate-autodiscover/rust-1.x
4m 31s
feat(coverage): bigWig tracks from the alignment pass CI #521: Pull request #166 opened by BenjaminDEMAILLE
Action required BenjaminDEMAILLE:feat/coverage-bigwig
BenjaminDEMAILLE:feat/coverage-bigwig
Action required
fix(deps): bump crossbeam-epoch for RUSTSEC-2026-0204 CI #520: Pull request #165 opened by BenjaminDEMAILLE
Action required BenjaminDEMAILLE:fix/audit-crossbeam-epoch
BenjaminDEMAILLE:fix/audit-crossbeam-epoch
Action required
feat(rna): Picard CollectRnaSeqMetrics CI #519: Pull request #164 opened by BenjaminDEMAILLE
Action required BenjaminDEMAILLE:feat/rna-rnaseq-metrics
BenjaminDEMAILLE:feat/rna-rnaseq-metrics
Action required
feat(protein): coding-region QC CI #518: Pull request #162 opened by BenjaminDEMAILLE
1h 13m 32s BenjaminDEMAILLE:feat/protein-coding
BenjaminDEMAILLE:feat/protein-coding
1h 13m 32s
feat(rna): RSeQC geneBody_coverage and read_GC CI #517: Pull request #161 opened by BenjaminDEMAILLE
Action required BenjaminDEMAILLE:feat/rna-genebody-readgc
BenjaminDEMAILLE:feat/rna-genebody-readgc
Action required
feat(reads): raw FASTQ quality control CI #516: Pull request #160 synchronize by BenjaminDEMAILLE
Action required BenjaminDEMAILLE:feat/reads-fastq
BenjaminDEMAILLE:feat/reads-fastq
Action required
feat(protein): mass spectrometry QC from mzML CI #515: Pull request #159 synchronize by BenjaminDEMAILLE
2h 25m 16s BenjaminDEMAILLE:feat/protein-spectra
BenjaminDEMAILLE:feat/protein-spectra
2h 25m 16s
feat(protein): add the protein subcommand and its sequence mode CI #514: Pull request #158 synchronize by BenjaminDEMAILLE
2h 26m 51s BenjaminDEMAILLE:feat/protein-skeleton
BenjaminDEMAILLE:feat/protein-skeleton
2h 26m 51s
feat(reads): raw FASTQ quality control CI #513: Pull request #160 opened by BenjaminDEMAILLE
Action required BenjaminDEMAILLE:feat/reads-fastq
BenjaminDEMAILLE:feat/reads-fastq
Action required
feat(protein): mass spectrometry QC from mzML CI #512: Pull request #159 opened by BenjaminDEMAILLE
Action required BenjaminDEMAILLE:feat/protein-spectra
BenjaminDEMAILLE:feat/protein-spectra
Action required
feat(protein): add the protein subcommand and its sequence mode CI #511: Pull request #158 opened by BenjaminDEMAILLE
13h 31m 45s BenjaminDEMAILLE:feat/protein-skeleton
BenjaminDEMAILLE:feat/protein-skeleton
13h 31m 45s
feat(dna): Qualimap bamqc, plus the DNA documentation pages CI #510: Pull request #156 synchronize by BenjaminDEMAILLE
15h 12m 21s BenjaminDEMAILLE:feat/dna-qualimap-docs
BenjaminDEMAILLE:feat/dna-qualimap-docs
15h 12m 21s
feat(dna): Qualimap bamqc, plus the DNA documentation pages CI #509: Pull request #156 opened by BenjaminDEMAILLE
15h 54m 44s BenjaminDEMAILLE:feat/dna-qualimap-docs
BenjaminDEMAILLE:feat/dna-qualimap-docs
15h 54m 44s
feat(dna): targeted mode, CollectHsMetrics and CollectGcBiasMetrics CI #508: Pull request #155 opened by BenjaminDEMAILLE
16h 3m 10s BenjaminDEMAILLE:feat/dna-targeted
BenjaminDEMAILLE:feat/dna-targeted
16h 3m 10s
feat(dna): Picard CollectWgsMetrics and CollectInsertSizeMetrics CI #507: Pull request #154 opened by BenjaminDEMAILLE
16h 37m 29s BenjaminDEMAILLE:feat/dna-picard-core
BenjaminDEMAILLE:feat/dna-picard-core
16h 37m 29s
feat: add the rustqc dna subcommand (depth of coverage, samtools, preseq) CI #506: Pull request #153 synchronize by BenjaminDEMAILLE
18h 23m 8s BenjaminDEMAILLE:feat/dna-skeleton
BenjaminDEMAILLE:feat/dna-skeleton
18h 23m 8s
feat: add the rustqc dna subcommand (depth of coverage, samtools, preseq) CI #505: Pull request #153 opened by BenjaminDEMAILLE
19h 9m 4s BenjaminDEMAILLE:feat/dna-skeleton
BenjaminDEMAILLE:feat/dna-skeleton
19h 9m 4s
refactor: extract assay-agnostic analyses into src/common/ CI #504: Pull request #152 opened by BenjaminDEMAILLE
19h 58m 8s BenjaminDEMAILLE:feat/dna-common-extract
BenjaminDEMAILLE:feat/dna-common-extract
19h 58m 8s
chore: update actions/setup-node action to v6.5.0 CI #503: Pull request #150 opened by seqeralabs-renovate Bot
4m 53s renovate-autodiscover/actions-setup-node-6.x
renovate-autodiscover/actions-setup-node-6.x
4m 53s
chore: update actions/checkout action to v6.1.0 CI #502: Pull request #149 opened by seqeralabs-renovate Bot
5m 13s renovate-autodiscover/actions-checkout-6.x
renovate-autodiscover/actions-checkout-6.x
5m 13s
chore: update swatinem/rust-cache action to v2.9.2 CI #501: Pull request #148 opened by seqeralabs-renovate Bot
4m 23s renovate-autodiscover/swatinem-rust-cache-2.x
renovate-autodiscover/swatinem-rust-cache-2.x
4m 23s