Conda update

• Data updates
• Dockerfile improved with renv framework
• Improved consistency between Docker installation and Conda installation

Dashboard + 2020 update

• New report type output (flexdashboard)
• Multiple data updates
• MutationalPatterns for signature analysis
• Detection of kataegis

CancerMine + CIViC update

v0.8.4

0.8.4 release

ClinVar fix

• moved tumor type to main script
• bundle updates

VEP 97.3

• vcf2maf improvements
• other bug fixes
• Data bundle updates

Added Cancer_NOS

v0.8.1

0.8.1 release

Bundle update + OpenTargets

• data bundle updates
• inclusion of OpenTargets association scores
• inclusion of TCGA distributions for mutational burden
• inclusion of more options for tumor-only variant filtering

Data bundle update and bug fixes

v0.7.0

0.7.0

Minor CNA bug

v0.6.2.1

0.6.2.1 release

GRCh38 and copy number annotation

Fixed various bugs reported by users

• grch38 support for mutational signature analysis
• copy number annotation
• filtering stats shown in tumor-only option

0.6.2 also comes with updated data bundle.

Thanks to valuable contributions/testing by @vladsaveliev, @zacshi, @shukwong, @patidarr