Skip to content

Version refractor #69

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
abdelmounaimTA wants to merge 37 commits into
base: bloody
Choose a base branch
from
Open

Version refractor #69

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
37 commits
Select commit Hold shift + click to select a range
d35dfc4
First working version of python3
feghalya Feb 14, 2020
693e7a1
Code fixes and tests PASS
feghalya Feb 17, 2020
149714f
Add gtf2bed function to GTF parser
feghalya Feb 17, 2020
4b95d79
Update genomes and minor python3 fixes
feghalya Feb 18, 2020
13761bd
Fix Mouse.GRCm38.98 genome
feghalya Feb 18, 2020
a31a7ab
Update .travis.yml
feghalya Feb 18, 2020
6bc774b
Merge branch 'py3-migration'
feghalya Feb 19, 2020
153f02e
Add exons and CDS gtf2bed utilities
feghalya Feb 21, 2020
32468f0
Bump version to 2.0.0
feghalya Feb 21, 2020
f4ec8b4
Update README.rst
tariqdaouda Feb 21, 2020
9393815
Update README.rst
tariqdaouda Feb 25, 2020
5b15f0e
Update setup.py
feghalya Mar 5, 2020
008a15c
Deterministic version of getSequenceVariants
courcelm Mar 24, 2020
843290a
Merge pull request #52 from courcelm/patch-9
feghalya Mar 25, 2020
9e5bd66
Convert readme examples to python 3.5.
joerg84 Mar 31, 2020
a552969
Updated Copyright.
joerg84 Mar 31, 2020
ca4647a
Bug fixes in GTF to BED
feghalya Mar 31, 2020
13808b1
Make 3.5 the official python version
feghalya Mar 31, 2020
c263cb6
Add notebook example and update README
feghalya Apr 2, 2020
abcbdff
Fixes to README
feghalya Apr 2, 2020
952dc32
Update genomic_graph.ipynb
feghalya Apr 2, 2020
2cb6c4b
Merge pull request #54 from arangoml/cr
tariqdaouda Apr 2, 2020
8d91cd6
Merge pull request #55 from tariqdaouda/py3-migration
tariqdaouda Apr 2, 2020
a80ca42
Merge branch '3.5' of https://github.com/arangoml/pyGeno into arangom…
feghalya Apr 2, 2020
b397bf3
Merge branch 'arangoml-3.5'
feghalya Apr 2, 2020
d6ae04d
Fixed bug in python version check
Apr 27, 2020
a4945ac
Merge pull request #56 from ealong/version-check
feghalya Apr 27, 2020
c284e32
optimizing code
WIZARDELF May 31, 2017
673c1c6
Update UsefulFunctions.py
WIZARDELF May 31, 2017
5c32f44
Update UsefulFunctions.py
WIZARDELF May 31, 2017
8310c38
Update UsefulFunctions.py
feghalya Sep 15, 2021
bfa47b4
Merge branch 'WIZARDELF-patch-1'
feghalya Sep 15, 2021
7d11bb0
Fix issue where datawraps were not being copied
feghalya Sep 16, 2021
ac879d3
Fix warnings in sphinx
feghalya Sep 16, 2021
ab12a6a
Bump version
feghalya Sep 16, 2021
7d376bd
Bug fix in GTFTools
feghalya Sep 11, 2021
237cc8a
Fix : Python 3.14 compatible
abdelmounaimTA May 13, 2026
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
4 changes: 2 additions & 2 deletions .travis.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -6,10 +6,10 @@ notifications:
language: python

python:
- "2.7"
- "3.5"

before_install:
- wget http://repo.continuum.io/miniconda/Miniconda-latest-Linux-x86_64.sh -O miniconda.sh
- wget http://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh
- bash miniconda.sh -b -p $HOME/miniconda
- export PATH="$HOME/miniconda/bin:$PATH"
- conda update --yes conda
Expand Down
Loading