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Uniquely assigned reads seem non-unique

Status: Open.

#291 In ablab/IsoQuant;

· airichli opened on Feb 21, 2025

Inconsistency among *read_assignments.tsv, *.transcript_counts.tsv, and *.gene_counts.tsv

questionFurther information is requestedFurther information is requested

Status: Open.

#290 In ablab/IsoQuant;

· airichli opened on Feb 19, 2025

Count Output

Status: Open.

#289 In ablab/IsoQuant;

· Haisuccess93 opened on Feb 18, 2025

Multiple samples and single samples produce some transcripts of GTF somewhat differently

Status: Open.

#287 In ablab/IsoQuant;

· Tang-pro opened on Feb 17, 2025

Failed to visualization

Status: Open.

#286 In ablab/IsoQuant;

· Seongmin-Jang-1165 opened on Feb 15, 2025

database disk image is malformed

Status: Open.

#285 In ablab/IsoQuant;

· dawangran opened on Feb 14, 2025

IsoQuant fails on index construction for large genomes

enhancementNew feature or requestNew feature or request

input dataIssue is caused by input dataIssue is caused by input data

Status: Open.

#284 In ablab/IsoQuant;

· petersbrC opened on Feb 13, 2025

Terminal exons with exclude_counts?

algorithmIssue requires algorithmic improvementIssue requires algorithmic improvement

enhancementNew feature or requestNew feature or request

Status: Open.

#283 In ablab/IsoQuant;

· qsonehara opened on Feb 12, 2025

No start_codon and stop_codon in GTF file

questionFurther information is requestedFurther information is requested

Status: Open.

#282 In ablab/IsoQuant;

· Tang-pro opened on Feb 6, 2025

Redundant isoforms

algorithmIssue requires algorithmic improvementIssue requires algorithmic improvement

enhancementNew feature or requestNew feature or request

questionFurther information is requestedFurther information is requested

Status: Open.

#281 In ablab/IsoQuant;

· KMbio43 opened on Feb 2, 2025

Scaling Isoquant

performanceIssues related to computational perfromanceIssues related to computational perfromance

Status: Open.

#280 In ablab/IsoQuant;

· omarelgarwany opened on Jan 24, 2025

Process terminated while processing chromosomes

Status: Open.

#279 In ablab/IsoQuant;

· kwglam opened on Jan 24, 2025