Skip fastqc#1056

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jorondo1 wants to merge 4 commits into

nf-core:devfrom

jorondo1:skip_fastqc

Commits on Mar 31, 2026

Merge pull request #1005 from nf-core/dev
dialvarezs
authored

Commits on Jun 23, 2026

add a skip_fastqc parameter to the config and schema, and update the logic in main.nf to conditionally run FASTQC_RAW and FASTQC_TRIMMED
Jonathan Rondeau-Leclaire
committed
default skip_fastqc = false
Jonathan Rondeau-Leclaire
committed
skip_fastqc switch
Jonathan Rondeau-Leclaire
committed