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nf-core / mag Public

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feat: make chopper default for longread qc#1059

Open

dialvarezs wants to merge 8 commits into

nf-core:devnf-core/mag:devfrom

dialvarezs:refactor/default-lr-qc-chopperdialvarezs/mag:refactor/default-lr-qc-chopperCopy head branch name to clipboard

Conversation Commits8 (8)Checks Files changed

Open

feat: make chopper default for longread qc#1059
dialvarezs wants to merge 8 commits into
nf-core:devfrom
dialvarezs:refactor/default-lr-qc-chopper

Commits

Commits on Jun 25, 2026

refactor: make chopper default and add `longread_filtering_by_shortreads` parameter
dialvarezs
committed
chore: update docs
dialvarezs
committed
chore: update schema
dialvarezs
committed
Merge remote-tracking branch 'upstream/dev' into refactor/default-lr-qc-chopper
dialvarezs
committed
chore: update snapshots
dialvarezs
committed
chore: update changelog
dialvarezs
committed
chore: update snapshot
dialvarezs
committed
chore: set chopper cpus to 1
dialvarezs
committed

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