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    • netneurolab.github.io

      Public
      Network Neuroscience Lab Website
      SCSS
      1.3k000Updated Feb 2, 2026Feb 2, 2026
    • netneurotools

      Public
      Useful tools from the Network Neuroscience Lab
      Python
      3710945Updated Jan 29, 2026Jan 29, 2026
    • ceballos_neuropeptide-organization

      Public
      Repository for the project "Mapping neuropeptide signaling in the human brain"
      Python
      1700Updated Jan 26, 2026Jan 26, 2026
    • neuromaps-mouse

      Public
      Python
      1200Updated Jan 22, 2026Jan 22, 2026
    • hansen_synaptome

      Public
      Data and code supporting Hansen et al., 2025, bioRxiv "Synaptome architecture shapes regional dynamics in the mouse brain"
      Python
      0400Updated Jan 19, 2026Jan 19, 2026
    • pourmajidian_metabolism-genes

      Public
      Python
      1200Updated Dec 19, 2025Dec 19, 2025
    • bazinet_spins

      Public
      Code supporting Bazinet et al., 2025, "The effect of spherical projection on spin tests for brain maps" (Imaging Neuroscience)
      Python
      1000Updated Nov 17, 2025Nov 17, 2025
    • Farahani_Metabolic_Health

      Public
      Python
      0000Updated Oct 14, 2025Oct 14, 2025
    • pypyls

      Public
      A Python implementation of Partial Least Squares (PLS) decomposition
      Python
      3778153Updated Sep 18, 2025Sep 18, 2025
    • hansen_receptorvar

      Public
      Python
      0300Updated Sep 8, 2025Sep 8, 2025
    • Farahani_Blood_Perfusion

      Public
      Cerebral blood perfusion across biological systems and the human lifespan
      Python
      0400Updated Aug 28, 2025Aug 28, 2025
    • Farahani_ALS

      Public
      Network spreading and local biological vulnerability in amyotrophic lateral sclerosis
      Python
      1400Updated Aug 28, 2025Aug 28, 2025
    • luppi-cognitive-matching

      Public
      MATLAB code for Luppi et al (2025) "General anaesthesia reduces the uniqueness of brain functional connectivity across individuals and across species", Nature H…
      MATLAB
      0200Updated Jul 24, 2025Jul 24, 2025
    • hansen_many_networks

      Public
      Data and code supporting Hansen et al., 2023 PLOS Biology "Integrating multimodal and multiscale connectivity blueprints of the human cerebral cortex in health …
      Python
      53500Updated Jul 22, 2025Jul 22, 2025
    • milisav_hierarchical_modularity

      Public
      Data and code supporting Milisav et al., 2025 "Neuromorphic hierarchical modular reservoirs"
      Jupyter Notebook
      1000Updated Jul 9, 2025Jul 9, 2025
    • neuromaps

      Public
      A toolbox for comparing brain maps
      Python
      63317267Updated Apr 23, 2025Apr 23, 2025
    • pypmi

      Public
      A very small toolbox for working with data from the Parkinson's Progression Markers Initiative (PPMI)
      Python
      10000Updated Mar 8, 2025Mar 8, 2025
    • luppi-neurosynth-control

      Public
      Code for Luppi et al (2024) Nature Biomedical Engineering
      MATLAB
      3410Updated Feb 2, 2025Feb 2, 2025
    • luppi-genes-receptors-macaque

      Public
      MATLAB code for Luppi et al (2024) "Benchmarking macaque brain gene expression for horizontal and vertical translation"
      MATLAB
      0000Updated Jan 23, 2025Jan 23, 2025
    • liu_fc-pyspi

      Public
      Python
      11300Updated Jan 16, 2025Jan 16, 2025
    • markello_transcriptome

      Public
      Code and documentation supporting Markello et al, 2021, "Standardizing workflows in imaging transcriptomics with the abagen toolbox" (Biorxiv)
      TeX
      31010Updated Jan 12, 2025Jan 12, 2025
    • markello_ppmisnf

      Public
      Code supporting the recent preprint Markello et al., 2020
      Python
      83623Updated Jan 12, 2025Jan 12, 2025
    • liu_meg-scfc

      Public
      Python
      1100Updated Jan 12, 2025Jan 12, 2025
    • shafiei_megdynamics

      Public
      Code supporting Shafiei et al., 2023 "Neurophysiological signatures of cortical micro-architecture".
      Python
      2900Updated Jan 12, 2025Jan 12, 2025
    • shafiei_megfmrimapping

      Public
      Code supporting Shafiei et al., 2022 "Human electromagnetic and haemodynamic networks systematically converge in unimodal cortex and diverge in transmodal corte…
      Python
      3600Updated Jan 12, 2025Jan 12, 2025
    • abagen

      Public
      A toolbox for working with Allen Human Brain Atlas microarray expression data
      Python
      501400Updated Jan 12, 2025Jan 12, 2025
    • suarez_neuromorphicnetworks

      Public
      Code supporting Suarez et al., 2021 "Learning function from structure in neuromorphic networks". ()
      Python
      125310Updated Jan 12, 2025Jan 12, 2025
    • bazinet_multiscale

      Public
      Code and documentation supporting Bazinet et al., 2021, "Multiscale communication in cortico-cortical networks" (NeuroImage)
      Python
      2100Updated Jan 12, 2025Jan 12, 2025
    • marmoset_connectome

      Public
      Jupyter Notebook
      2000Updated Jan 12, 2025Jan 12, 2025
    • milisav_strength_nulls

      Public
      Data and code supporting Milisav et al., 2024 "A simulated annealing algorithm for randomizing weighted networks"
      Python
      2600Updated Jan 6, 2025Jan 6, 2025