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refactor: remove support for indicator files #254

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these used the filenames as the column names, which can cause headaches (e.g. case sensitivity, sources (1), ...)

Closes #192.

these used the filenames as the column names, which can cause headaches (e.g. case sensitivity, sources (1), ...)

Closes Reed-CompBio#192.
@tristan-f-r tristan-f-r added the infrastructure misc. changes made to SPRAS itself label Jun 3, 2025
@tristan-f-r tristan-f-r changed the title fix: remove support for indicator files refactor remove support for indicator files Jun 3, 2025
@tristan-f-r tristan-f-r changed the title refactor remove support for indicator files refactor: remove support for indicator files Jun 3, 2025
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Remove support for secondary node that uses the filename as the node attribute
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