Skip to content

Pull requests: Reed-CompBio/spras

New pull request New
32 Open 88 Closed
32 Open 88 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

chore: drop graphspace analysis Analysis of PRA outputs
#265 opened Jun 11, 2025 by tristan-f-r Loading…
2
4
refactor(dataset): drop unused edge_table parameter easy PRs which take at most a minute to review with little thinking. refactor Changes that don't actually improve anything except for code quality.
#263 opened Jun 10, 2025 by tristan-f-r Loading…
feat: RWR algorithm Pathway reconstruction algorithm to add to SPRAS
#261 opened Jun 10, 2025 by tristan-f-r Loading…
1
Profiling
#260 opened Jun 9, 2025 by jhiemstrawisc Loading…
5
fix: check if edge weights are between 0 and 1 easy PRs which take at most a minute to review with little thinking. infrastructure misc. changes made to SPRAS itself
#255 opened Jun 3, 2025 by tristan-f-r Loading…
1
4
refactor: remove support for indicator files infrastructure misc. changes made to SPRAS itself
#254 opened Jun 3, 2025 by tristan-f-r Loading…
1
4
perf: pickle summarize networks call analysis Analysis of PRA outputs
#253 opened Jun 3, 2025 by tristan-f-r Loading…
9
feat: EdgeLinker algorithm Pathway reconstruction algorithm to add to SPRAS
#252 opened Jun 3, 2025 by tristan-f-r Loading…
1
feat: BTB algorithm Pathway reconstruction algorithm to add to SPRAS
#250 opened Jun 3, 2025 by tristan-f-r Loading…
6
Finish algorithm similarity eval analysis Analysis of PRA outputs
#248 opened Jun 2, 2025 by ntalluri Loading…
15
feat: DIAMOnD algorithm Pathway reconstruction algorithm to add to SPRAS question Further information is requested
#247 opened May 30, 2025 by tristan-f-r • Draft
1
3
chore: restrict MEO to alpine algorithm Pathway reconstruction algorithm to add to SPRAS
#242 opened May 29, 2025 by tristan-f-r Loading…
3
feat: ResponseNet algorithm Pathway reconstruction algorithm to add to SPRAS
#241 opened May 29, 2025 by tristan-f-r Loading…
7
feat: ROBUST algorithm Pathway reconstruction algorithm to add to SPRAS
#240 opened May 28, 2025 by tristan-f-r Loading…
1
1
style: yamlfmt easy PRs which take at most a minute to review with little thinking. infrastructure misc. changes made to SPRAS itself
#239 opened May 28, 2025 by tristan-f-r Loading…
1
6
fix: let raw_pathway_df handle present headers but no data infrastructure misc. changes made to SPRAS itself
#236 opened May 28, 2025 by tristan-f-r Loading…
1
34
fix: custom installation of DOMINO algorithm Pathway reconstruction algorithm to add to SPRAS
#235 opened May 27, 2025 by tristan-f-r Loading…
1
9
refactor(contributing): clean up local_neighborhood documentation Improvements or additions to documentation
#229 opened May 27, 2025 by tristan-f-r Loading…
fix: tighten & relax yaml parsing constraints infrastructure misc. changes made to SPRAS itself
#228 opened May 26, 2025 by tristan-f-r Loading…
18
feat: experimental podman support infrastructure misc. changes made to SPRAS itself
#227 opened May 26, 2025 by tristan-f-r • Draft
1
6
fix: make omicsintegrator2 work offline algorithm Pathway reconstruction algorithm to add to SPRAS
#226 opened May 26, 2025 by tristan-f-r Loading…
1
4
feat: netmix2 algorithm Pathway reconstruction algorithm to add to SPRAS
#225 opened May 23, 2025 by tristan-f-r • Draft
1
16
feat: direction support on apsp algorithm Pathway reconstruction algorithm to add to SPRAS
#223 opened May 22, 2025 by tristan-f-r Loading…
1
25
feat: local neighborhood algorithm Pathway reconstruction algorithm to add to SPRAS
#221 opened May 22, 2025 by tristan-f-r Loading…
1
fix: friendly logging infrastructure misc. changes made to SPRAS itself
#220 opened May 22, 2025 by tristan-f-r Loading…
1
25
ProTip! no:milestone will show everything without a milestone.