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Transform_symmetrize_v3

Adrian Quintana edited this page Dec 11, 2017 · 1 revision

!xmipp_transform_symmetrize (v3.0)

Usage

Symmetrize volumes and images

Parameters

$``: Input file: metadata, stack, volume or image. $--mode &lt;modeoverwrite> where <mode> can be:

    • $--label &lt;image_labelimage> $-o, --output &lt;output_file> $--oroot &lt;root> $: For 2D images: a number For 3D volumes: a symmetry file or point-group description Valid point-group descriptions are: C1, Ci, Cs, Cn (from here on n must be an integer number with no more than 2 digits) Cnv, Cnh, Sn, Dn, Dnv, Dnh, T, Td, Th, O, Oh I, I1, I2, I3, I4, I5, Ih For a full description of symmetries look at&nbsp;<a href="http://xmipp.cnb.csic.es/twiki/bin/view/Xmipp/Symmetry">http://xmipp.cnb.csic.es/twiki/bin/view/Xmipp/Symmetry</a> $: For 3D volumes: do not generate symmetry subgroup $``: by default, the image/volume is wrapped

Examples and notes

Symmetrize a list of images with 6 fold symmetry

xmipp_symmetrize -i input.sel --sym 6
Symmetrize with i3 symmetry and the volume is not wrapped
xmipp_symmetrize -i input.vol --sym i3 --dont_wrap

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