Skip to content

Sciencific Data and Resources

Jump to bottom
Genomics Division, ITER edited this page Aug 3, 2020 · 15 revisions

COVID-19

A public repository of scientific and media resources of SARS-CoV-2 related COVID-19 maintained by ITER.

Sciencific Data and Resources

2019 Novel Coronavirus COVID-19 (2019-nCoV) Data Repository by Johns Hopkins CSSE

Análisis de los datos de COVID-19 en España, por Z Data Labs

Artic Network

Bioinformatics Unit of Instituto de Salud Carlos III (Spain)

Bioinformatics resources for SARS-CoV-2

Broad COVID-19 Testing Dashboard

CIVIO datos Pruebas PCR para detectar casos de coronavirus. Actualización diaria con el número (total y relativo) de PCR realizadas por comunidades autónomas para diagnosticar casos de covid-19

Clustering COVID-19 research papers

COG-UK The New Microreact dashboard

Coinfections in COVID-19

CORD-19. COVID-19 Open Research Dataset

Coronavirus analysis tools developed by scientists at the University of Tartu, Estonia

Coronavirus COVID-19 Global Cases by the Center for Systems Science and Engineering (CSSE) at Johns Hopkins University (JHU)

COVID-19 Collaboration Platform

COVID-19 Data Hub. Funded by the Institute for Data Valorization IVADO, Canada

Coronavirus Structural Task Force

COVID-19 3D visualizer

COVID-19 Data Portal

COVID-19 Host Genetics Initiative

COVID-19: on average only 6% of actual SARS-CoV-2 infections detected worldwide, University of Göttingen

COVID-19 Open Research Dataset Challenge (CORD-19)

COVID-19 databoard ISCIII

COVID-19 GENOTYPING TOOL (Genotyping SARS-CoV-2 through an interactive web application)

COVID-19: Government Response Stringency Index

COVID-19 Law Lab collecting legal documents from the COVID-19 response

COVID-19 scenarios

CDC Morbidity and Mortality Weekly Report (MMWR) Novel Coronavirus Reports

COVID-19 R-shiny codes

CDC Information for Laboratories RT-PCR resources

COVID-19 Tracker Shiny app in R

CSVS Babelomics Collaborative Spanish Variant Server to visualize polimorphisms in the Spanish population in genes related with COVIDー19

DataStudio International-Domestic spreading of 2019-nCoV-V4

Databriks data collection

Datadista data on COVID-19

Dashboard del Sistema para la Vigilancia de la mortalidad diaria por todas las causas en España (Informe MoMo)

Discourse Data Against Covid19

GISAID

EMBL-EBI COVID-19 Portal

Epidemic Calculator

ESTUDIO ENE-COVID19: PRIMERA RONDA. ESTUDIO NACIONAL DE SERO-EPIDEMIOLOGÍA DE LA INFECCIÓN POR SARS-COV-2 EN ESPAÑA. INFORME PRELIMINAR 13 DE MAYO DE 2020

ETE team modeling group ( MIVEGEC Laboratory , CNRS, IRD, University of Montpellier)

European mortality monitoring: EUROMOMO

European Centre for Disease Prevention and Control European Centre for Disease Prevention and Control, data

European Data Portal, data for Spain, Evolución de enfermedad por el coronavirus (COVID-19)

European Lung Foundation COVID-19) data center

European Virus Archive Global

Evolución del coronavirus (COVID-19) en Euskadi

Explore the Spread of Covid-19, Humboldt-Universität zu Berlin

How many tests for COVID-19 are being performed around the world?

IHME, Institute for Health Metrics and Evaluation, USA data

Imperial College London reports

INB/ELIXIR-ES nodes and TransBioNet members effort on COVID-19 research

Informes MoMo (Sistema de Monitorización de la Mortalidad Diaria (Sistema MoMo) del Instituto de Salud Carlos III

Instituto de Matemática Interdisciplinar de la Universitat Politécnica de Valencia (UPV) Modelling Uncertainty Quantification, Reports in PDF Modelización epidemiolgica: Informes

IRRD COVID-19 em tempo real

Jupyter R notebook for prediction modelling of Covid-19 data. Predictive modelling of 2019-nCov outbreak data in Canary Islands. Departamento de Matemáticas, Estadística e Investigación Operativa, ULL

MIDAS 2019 Novel Coronavirus Repository

Ministerio de Sanidad, España

National Genomics Data Center, Beijing Institute of Genomics, Chinese Academy of Sciences Released genomes

NCBI SARS-CoV-2 (Severe acute respiratory syndrome coronavirus 2) Sequences

NIH Coronavirus Disease 2019 Situation Summary

Nanopore (ONT) Novel Coronavirus information(COVID-19)

Nextstrain. Real-time tracking of pathogen evolution

NIH Open-Access Data and Computational Resources to Address COVID-19

NIKKEI ASIAN REVIEW. Coronavirus infection tracker -World Map-

OpenTargets COVID-19 repository

PolyMath COVID-19 dataset clearinghouse

Reich Lab COVID-19 Forecast Hub

Rivas Lab analysis of existing data

SAFECAST COVID-19 TESTING MAP

SARS-CoV-2 Alignment Screen

SARS-CoV-2 Galaxy Project

SARS-CoV-2 pathways

SARS-CoV-2 Sequencing Resources

SWISSMODEL homology models

The COVID Tracking Project, testing data available for US states and territories

Tout sur SARS-Cov-2 / COVID-19 à l'Institut Psteur

Virological

UCSC COVID browser

Uniform analysis of coronavirus and SARS-COV-2 nanopore direct RNA sequencing datasets using MasterOfPores

United Against COVID-19

Universidad de Granada - Genyo DatAC: Data Against COVID-19

Virus Pathogen Resource: VIPR SARS-CoV-2 resource (tools for sequence and structure analysis, comparative genomics and phenotype studies)

WHO updates COVID-19 dashboard with better data visualization

World-o-Meter

Zoic Labs and The Krogan Lab SARS-Cov-2 Virus-HUman Protein-Protein Interaction Map

List of institutional websites for the governments of each of the Spanish Autonomous Regions (17) and Cities (2).

Autonomous Regions and Cities in Spain:

Casos de Covid-19 en España por Comunidades Autónomas, by CJP

By JMLS @resocios

Clone this wiki locally