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Backport PR #1899 on branch 0.11.x (Switch tutorials to myst-nb)

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Status: Merged (completed).

scverse/anndatanumber 1904

#1904 In scverse/anndata;

· by meeseeksmachine was closed on Mar 7, 2025

[pre-commit.ci] pre-commit autoupdate

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Status: Merged (completed).

scverse/anndatanumber 1846

#1846 In scverse/anndata;

· by pre-commit-ci was closed on Feb 4, 2025

Backport PR #1846 on branch 0.11.x ([pre-commit.ci] pre-commit autoupdate)

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Status: Merged (completed).

scverse/anndatanumber 1848

#1848 In scverse/anndata;

· by meeseeksmachine was closed on Feb 4, 2025

(chore): Update to Ruff 0.9 and add EM lints

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Status: Merged (completed).

scverse/anndatanumber 1825

#1825 In scverse/anndata;

· by flying-sheep was closed on Jan 16, 2025

(docs): Qualname-override everything we can

dev process

docs

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Status: Merged (completed).

scverse/anndatanumber 1830

#1830 In scverse/anndata;

· by flying-sheep was closed on Jan 17, 2025

Backport PR #1868 on branch 0.11.x (Revert "(fix): bound sphinx due to autodoc incompat")

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Status: Merged (completed).

scverse/anndatanumber 1871

#1871 In scverse/anndata;

· by meeseeksmachine was closed on Feb 25, 2025

(fix): manage dask cluster from controller

Status: Merged (completed).

scverse/anndatanumber 1929

#1929 In scverse/anndata;

· by flying-sheep was closed on Mar 21, 2025

fix outer concatenation along var when varm is not empty

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Status: Merged (completed).

scverse/anndatanumber 1911

#1911 In scverse/anndata;

· by ilia-kats was closed on Mar 25, 2025

(fix): force dask cluster tests to be run in same process

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Status: Merged (completed).

scverse/anndatanumber 1932

#1932 In scverse/anndata;

· by ilan-gold was closed on Mar 25, 2025

Backport PR #1932: (fix): force dask cluster tests to be run in same process

Status: Merged (completed).

scverse/anndatanumber 1935

#1935 In scverse/anndata;

· by ilan-gold was closed on Mar 25, 2025

Backport PR #1911 on branch 0.11.x (fix outer concatenation along var when varm is not empty)

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Status: Merged (completed).

scverse/anndatanumber 1936

#1936 In scverse/anndata;

· by meeseeksmachine was closed on Mar 25, 2025

Backport PR #1934 on branch 0.11.x ([pre-commit.ci] pre-commit autoupdate)

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Status: Merged (completed).

scverse/anndatanumber 1937

#1937 In scverse/anndata;

· by meeseeksmachine was closed on Mar 26, 2025

[pre-commit.ci] pre-commit autoupdate

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Status: Merged (completed).

scverse/anndatanumber 1934

#1934 In scverse/anndata;

· by pre-commit-ci was closed on Mar 26, 2025

Backport PR #1879 on branch 0.11.x ((chore): update license copyright)

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Status: Merged (completed).

scverse/anndatanumber 1881

#1881 In scverse/anndata;

· by meeseeksmachine was closed on Feb 27, 2025

(chore): update license copyright

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Status: Merged (completed).

scverse/anndatanumber 1879

#1879 In scverse/anndata;

· by ilan-gold was closed on Feb 27, 2025

(fix): add convert_strings_to_categoricals to methods

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Status: Merged (completed).

scverse/anndatanumber 1914

#1914 In scverse/anndata;

· by flying-sheep was closed on Mar 17, 2025

Backport PR #1922 on branch 0.11.x ([pre-commit.ci] pre-commit autoupdate)

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Status: Merged (completed).

scverse/anndatanumber 1925

#1925 In scverse/anndata;

· by meeseeksmachine was closed on Mar 18, 2025

Use same local Dask cluster in tests

dev process

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Status: Merged (completed).

scverse/anndatanumber 1924

#1924 In scverse/anndata;

· by flying-sheep was closed on Mar 18, 2025

(fix): manage dask cluster from controller

run-gpu-ci

Status: Closed (abandoned).

scverse/anndatanumber 1931

#1931 In scverse/anndata;

· by ilan-gold was closed on Mar 25, 2025

(fix): add dask upper bound for sparse issue

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Status: Merged (completed).

scverse/anndatanumber 1862

#1862 In scverse/anndata;

· by ilan-gold was closed on Feb 18, 2025

Backport PR #1862 on branch 0.11.x ((fix): add dask upper bound for sparse issue)

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Status: Merged (completed).

scverse/anndatanumber 1863

#1863 In scverse/anndata;

· by meeseeksmachine was closed on Feb 18, 2025

Backport CS* tightening

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Status: Merged (completed).

scverse/anndatanumber 1889

#1889 In scverse/anndata;

· by flying-sheep was closed on Mar 6, 2025

actually make CSRDataset and CSCDataset usable

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Status: Closed (abandoned).

scverse/anndatanumber 1891

#1891 In scverse/anndata;

· by flying-sheep was closed on Mar 6, 2025

Auto backport of pr 1624 on 0.11.x

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Status: Merged (completed).

scverse/anndatanumber 1893

#1893 In scverse/anndata;

· by ilan-gold was closed on Mar 7, 2025

Format TOML with taplo

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Status: Merged (completed).

scverse/anndatanumber 1898

#1898 In scverse/anndata;

· by flying-sheep was closed on Mar 7, 2025